Pairwise Alignments

Query, 303 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 312 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  167 bits (423), Expect = 3e-46
 Identities = 97/286 (33%), Positives = 151/286 (52%), Gaps = 2/286 (0%)

Query: 4   LNGMMLFAAVVRAKGFSQAARETGHPKSTISRKIAQLEEELGVRLLQRDTRNLSLTQVGA 63
           L  + +F  V RA  FS AAR  G  KS +S ++A LE  LGV+L+QR TR+LSLT+ G 
Sbjct: 5   LEPIAIFTHVARAGSFSAAARRLGISKSKVSTQVADLEHRLGVQLIQRTTRSLSLTEAGH 64

Query: 64  LFYQHCDSIRNEVEAAKAVIESTHDDVSGSLRIAIPVSFSQELIANLCSGFMRLYPNVEL 123
           L Y   + +  + E A A + + +D   G L++ I  SF    I      FM  +P +EL
Sbjct: 65  LLYLQGEELLRDAEQAIASVHNLNDATRGVLKVGISQSFGAMHIIPALPSFMAKHPELEL 124

Query: 124 DVQFTDNDIGLVGEGYDIAIKYGPLQSSDLVARLLFERQPILVASPGYLKTRGTPATPKE 183
            V   D+ + +V EG D+ +         +VAR L + Q +LVASP Y+   G P+ P++
Sbjct: 125 QVSLLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLVASPDYIAKHGEPSRPEQ 184

Query: 184 LSDHSGILL-GTSRSAPIWPLGKGTRKTMVSFQRKVRVNSPIMVKQLALDDFGIAMLSNS 242
           L DH+ ++  G      +W   KG     +      RV++   +K  A+   G+  L++ 
Sbjct: 185 LVDHNCLVYQGEWHEHSMWQFKKGDDYCEIGVSGNFRVDNAPALKSAAISGLGVVYLASY 244

Query: 243 ACKTELANGQLVPILQEWPM-EPFKVYGVYSSRRQLATNISAFLDF 287
             + E+A G LVP+L++W +     +  VY  R+ LA  +SAF++F
Sbjct: 245 LMEDEIAKGTLVPLLKDWQLTHHLPLQAVYPRRKHLAPKVSAFIEF 290