Pairwise Alignments

Query, 303 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 301 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  159 bits (402), Expect = 8e-44
 Identities = 98/283 (34%), Positives = 152/283 (53%), Gaps = 3/283 (1%)

Query: 7   MMLFAAVVRAKGFSQAARETGHPKSTISRKIAQLEEELGVRLLQRDTRNLSLTQVGALFY 66
           M +F  VV   GFS+AA       S +S+ IA+LE  LG RLL R TR L +T  G  FY
Sbjct: 12  MEIFVRVVELGGFSRAAAAANMTPSAVSKLIARLESRLGARLLNRSTRQLQITPEGCAFY 71

Query: 67  QHCDSIRNEVEAAKAVIESTHDDVSGSLRIAIPVSFSQELIANLCSGFMRLYPNVELDVQ 126
           +    I  ++E A+         + G +RI    S++  ++A +   F+ L+P + LD+ 
Sbjct: 72  ERATRILADLEEAERAAGERERPI-GRVRINTSASYATHILAPILPRFLALHPEITLDIV 130

Query: 127 FTDNDIGLVGEGYDIAIKYGPLQSSDLVARLLFERQPILVASPGYLKTRGTPATPKELSD 186
            TD  + L+ E  D+A++ GPL+SS LVAR L E + ++ A+P YLK  G P T  +L  
Sbjct: 131 QTDLVVDLLAERMDVAVRAGPLKSSSLVARKLGETRMVIAAAPDYLKRCGVPQTISDLEG 190

Query: 187 HSGILLGTSRSAPIWPLGKGTRKTMVSFQRKVRVNSPIMVKQLALDDFGIAMLSNSACKT 246
           H+ + LG +RS   WPL  G +  ++    +V+V+    +++LAL   G+  L+    + 
Sbjct: 191 HNCLALGYARSIDGWPLQDGGKTVVIPATGRVQVSDGEGLRRLALAGVGLVRLAAFTIRE 250

Query: 247 ELANGQLVPILQEWPM-EPFKVYGVYSSRR-QLATNISAFLDF 287
           ++A G+LV +L      E    + VY  +R  L + I A LDF
Sbjct: 251 DIAAGRLVSVLDHLDTGETETFHAVYVGQRGPLPSRIRALLDF 293