Pairwise Alignments

Query, 243 a.a., conserved hypothetical protein TIGR00046 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 259 a.a., Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  323 bits (827), Expect = 3e-93
 Identities = 162/243 (66%), Positives = 195/243 (80%)

Query: 1   MRVPRIYQPQPLAVNQQLNLDEDGAAHIGKVLRMGNGEQISLFNGDGHDYLAEIIDAAKK 60
           MR+PRIY P+ L    Q++L ED A HIG+VLRMG G+ + LF+G    + AEII A+KK
Sbjct: 17  MRIPRIYHPELLTSGTQISLCEDAANHIGRVLRMGPGQALQLFDGSNQVFDAEIISASKK 76

Query: 61  SVTVKVLSCEANPSESPLNLHLGQVISRGDRMEFTIQKSVELGVNTITPLFSDRCGVKLS 120
           SV V+V+  E +  ESPL++HLGQV+SRG++MEFTIQKS+ELGV+ ITPLFS+RCGVKL 
Sbjct: 77  SVEVQVMKGEIDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLD 136

Query: 121 GERLDKKIQQWQKIVISACEQSGRSQVPVVRPAMELQQWCSEPTSALKLNLHPRAAHGIN 180
            ERL+KK QQWQKI I+ACEQ GR++VP +RP M L+ WC+E  S LKLNLHPRA   IN
Sbjct: 137 SERLNKKRQQWQKIAIAACEQCGRNRVPEIRPPMALEAWCAEQDSGLKLNLHPRAHASIN 196

Query: 181 GLDLSHTRVRLLIGPEGGLSAEEIAMTETHQFTDVLLGPRVLRTETASLTAITALQLRFG 240
            L L   RVRLLIGPEGGLSA+EIAMT  +QFTD+LLGPRVLRTET +LTAITALQ+RFG
Sbjct: 197 TLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFG 256

Query: 241 DLG 243
           DLG
Sbjct: 257 DLG 259