Pairwise Alignments

Query, 243 a.a., conserved hypothetical protein TIGR00046 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 239 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 90.5 bits (223), Expect = 3e-23
 Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 18/223 (8%)

Query: 27  HIGKVLRMGNGEQISLFNGDGHDYLAEIIDAAKKSVTVKVLSCEANPSESPLNLHLGQVI 86
           ++  VLRM +G +I LFNG   ++ A++   ++K +++  L  +  P      LH     
Sbjct: 25  YLANVLRMTDGAEILLFNGRDGEWKAKLSFPSRKKISLVPLE-QTRPQPDAAELHYLFAP 83

Query: 87  SRGDRMEFTIQKSVELGVNTITPLFSDRCGVKLSGERLDKKIQQWQKI---VISACEQSG 143
            +  RM++ +QK+VE+G   + P+ +         + +  KI   +K+    I A EQ G
Sbjct: 84  LKVGRMDYLVQKAVEMGAGLLQPVMT---------QHVQGKIHNSEKLRANAIEAAEQCG 134

Query: 144 RSQVPVVRPAMELQQWCSEPTSALKLNLHPRAAHGINGLDL----SHTRVRLLIGPEGGL 199
              +P V   ++L++         ++        G N L +       ++ LL+GPEGG 
Sbjct: 135 ILSLPEVAEPVKLKEMLETWPEDRRIIYCDEGDAGQNPLPILQAVKERKIALLVGPEGGF 194

Query: 200 SAEEIAMTETHQF-TDVLLGPRVLRTETASLTAITALQLRFGD 241
           S EE A+  +  F T + LGPR+LR +TA++ A+  +Q   GD
Sbjct: 195 SEEERALLRSLAFVTPIPLGPRILRADTAAVAALAVIQAVIGD 237