Pairwise Alignments

Query, 653 a.a., TonB-dependent receptor C-terminal domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 715 a.a., TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  111 bits (277), Expect = 1e-28
 Identities = 157/709 (22%), Positives = 277/709 (39%), Gaps = 111/709 (15%)

Query: 26  AADDTSTAKVDEHLVVIGRSDKTPLNIAANVNVIDAAAIEMSGATNLTDVLRGQSGIQIS 85
           A  D+   ++  H     R +     +   ++V+D   I+ SG T   D+L   + +   
Sbjct: 37  AIPDSDIERLSIHYRQAYRGNVPATELPQAISVLDEQLIKDSGLTRFQDLLDYSASVARQ 96

Query: 86  DNNIGT--SFAMRGFSASTAVNNTLILLDGRRLNNIDIAAPSLNAIPLNLVERVEILSGS 143
           +N  G   SF++RGF  +  + +      G  +N  +          L+ V  VEIL G 
Sbjct: 97  NNGGGLWDSFSLRGFPGNENMPS------GYLINGFNGGRGFSGHRDLSNVAYVEILKGP 150

Query: 144 AGVLYGDQAVGGVINIVTKSPE-NTGGSVQLSGGSFNTYEGRGDVSGAINKDWRYFLSGS 202
              LYG    GG +NIVTK P+  T G ++ S GSF+ Y   GDV+  I     + ++G+
Sbjct: 151 GSALYGRSEPGGTVNIVTKKPQYQTSGYLKASKGSFDQYRLEGDVTSGITDTLAFRINGA 210

Query: 203 YNQGDNYRQHNANETGSILGRIQYKTATD-SFFVETSYYDDDRENPGSLTVDQFKFDPRQ 261
           + + D++R +  ++   +   ++++ + + S   E  Y   ++     + V    F+   
Sbjct: 211 WQEHDSFRDYVFSDKKIVTPSLRWQLSDESSLLYEVEYLKQEQLFDRGIVVLNNNFN--- 267

Query: 262 SSNKSEYVHE----MTTAARSG----YQHQLNQNWALAADLDYSDTLVSSVNWGAGSHNT 313
           +  +S Y+ E     TT   +G    Y+++L+ +W+L A  +Y D+ ++  +  A     
Sbjct: 268 TVPRSRYLGEPNDGATTVDATGHQLTYEYELSDDWSLTAGYNYRDSSLNGYSSDAELAKG 327

Query: 314 RSLLMFSPKALA------NYSTRQGEL---------------NLVTGLDI---------- 342
           R  L    + L       +Y++    +               NL+ G D           
Sbjct: 328 RQSLYDDGRTLTRQHRYRDYASEDHSVRAELSGQFDTGGLRHNLLLGADAYHYRLKTGLY 387

Query: 343 ----SRGKADYDSMA---------------RSNVQDMQSAYLQATVPLSHTLSYVVGGRY 383
                +G    D  A                   Q+   AYLQ  + L+      +G R+
Sbjct: 388 RYRGPKGAYAIDIFAPQYGAAQPDVSLLYENRETQNAWGAYLQDQLDLTGHWKLHLGLRF 447

Query: 384 ARVTDELVDGNVYPNGIDLDEDATAFEFGLNYRPSAEHRFYLRGDENFRFAKVDEQAYTP 443
            R   E+ +  V  +  D  +   + + GL Y+ S    FY    E F      + A  P
Sbjct: 448 DRYRQEIAE-QVKSSLSDQTDQRVSPKVGLVYQWSEALSFYGSYSEGFLPLSGTDYAGNP 506

Query: 444 KDVFGLKPQTGRSYEAGWDWTVAS---QSLRVSLYRLDLEDEIVFDPSAEKPVGGSFQGA 500
                 +P+  +S E G  +         +  SL   D +   +       PV   F   
Sbjct: 507 -----FEPEESQSVELGIKFNSTGFGVLPINGSLAWFDAQKSNIL---TSDPVNVGFSAT 558

Query: 501 NVNADASRRYGASADWDWQVTQALQLGLEYNYIDAEFTDGLNDGKKLSW----------- 549
              A ++   G   D   ++T+ L+  L Y Y++   T   ND   L W           
Sbjct: 559 LGEAKST---GLELDLAAELTENLEAKLSYAYLN---TRTANDSLNLDWGVLIPAGSPLV 612

Query: 550 -VAEHSGRGYVSMDVAEHI---QLFAEAIYTGERFVEGDNANQGEKLASY-VLGNLALNY 604
            V +H+G   +  D+ +      L     Y   R   GD+A+   +L SY +LG      
Sbjct: 613 NVPKHTGSLVLKQDLNDFSIDGHLGVTWRYVDSRL--GDSADPSFQLPSYQLLGVFFATR 670

Query: 605 SRDAWLASLRIDNLFDKDYVSSGYYGGNWGDGYYSGRGRDIRLTVGYRF 653
             ++   +L +DNL D+ Y++S  Y   W      G  R+++++V Y F
Sbjct: 671 LGESVSLALNVDNLLDEHYIASS-YSALWP---VPGEPRNVKVSVSYEF 715