Pairwise Alignments

Query, 653 a.a., TonB-dependent receptor C-terminal domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 663 a.a., ferric iron-catecholate outer membrane transporter (NCBI) from Escherichia coli BW25113

 Score = 79.3 bits (194), Expect = 5e-19
 Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 24/200 (12%)

Query: 15  LCSFSIIAPVMAADDTSTAKVDEHLVVIGRSDKTPLNIA-ANVNVIDAAAIEMSGATNLT 73
           L + S   PV+A DD       E +VV   S +  L  A A+++VI    ++     NL 
Sbjct: 14  LSAISCAWPVLAVDDDG-----ETMVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLK 68

Query: 74  DVLRGQSGIQIS---DNNIGTSFAMRGFSASTAVNNTLILLDGRRLNNIDIAAP----SL 126
           DVL+   G+Q++   DN  G S  +RG  +S     TLIL+DG+R+N+ +         L
Sbjct: 69  DVLKEVPGVQLTNEGDNRKGVS--IRGLDSSY----TLILVDGKRVNSRNAVFRHNDFDL 122

Query: 127 NAIPLNLVERVEILSGSAGVLYGDQAVGGVINIVTKSPENTGGSVQLSGGSFNTYEGRGD 186
           N IP++ +ER+E++ G    LYG  A+GGV+NI+TK              +   +  RGD
Sbjct: 123 NWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTVDTTIQEHRDRGD 182

Query: 187 VSGAINKDWRYFLSGSYNQG 206
                    ++F SG    G
Sbjct: 183 TYNG-----QFFTSGPLIDG 197