Pairwise Alignments

Query, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 302 a.a., ribokinase from Pseudomonas putida KT2440

 Score =  205 bits (522), Expect = 9e-58
 Identities = 121/300 (40%), Positives = 173/300 (57%), Gaps = 4/300 (1%)

Query: 4   ILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDFICH 63
           ++V+GS N D V+  + LP  G+TL   S+    GGKGANQAVA ARL      V  I +
Sbjct: 5   VVVVGSLNMDLVVRAQRLPRAGETLPGDSFFTVPGGKGANQAVAVARL---GGSVAMIGN 61

Query: 64  LGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVADNGENAIGIAAGANAHLTPL 123
           +G D  G ++  +   +GI  +G++    +S+G A+I V    +N I I  GAN  LTP 
Sbjct: 62  VGDDDYGRQLHRALYVEGIDCQGVSTCPAMSSGVALITVDAASQNCIVIIPGANGLLTPQ 121

Query: 124 ELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPAATQ-ELDYLKWVD 182
            + +  AL   A+ ++ QLE P  TV+  L     LG   +LNPAPA      D+   +D
Sbjct: 122 SVRRFDALLQAAEVIICQLEVPASTVAWTLARGHELGKQVILNPAPATGPLPADWFAHID 181

Query: 183 IITPNETEAEALTGIEVKHEEDAKLAAQWLHQQGITTVVITLGSKGAFISSPGFTGLIPA 242
            +TPNE+EAEALTG+ V  ++ A+ A + L Q G   V+ITLG++GA + +       PA
Sbjct: 182 YLTPNESEAEALTGVVVTDQDSARRAGERLLQLGAGKVIITLGAQGALLVTAQGHQHYPA 241

Query: 243 LTVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVSFANAASAITVTREGAQRAIPYRSEVS 302
             VQ +DT AAGDTF G    GL  G+    A++F   A+A++VTR GAQ +IPY +E++
Sbjct: 242 PHVQPLDTTAAGDTFIGGFAAGLVRGLEEGEAIAFGQRAAALSVTRAGAQPSIPYLAELT 301