Pairwise Alignments

Query, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 319 a.a., ribokinase from Paraburkholderia sabiae LMG 24235

 Score =  187 bits (475), Expect = 3e-52
 Identities = 108/301 (35%), Positives = 171/301 (56%), Gaps = 6/301 (1%)

Query: 4   ILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDFICH 63
           ++++G    D     + +P+ G+T+   ++++  GGKG+NQAVA AR     + V F+  
Sbjct: 10  VVILGIYVTDLTFRADRMPLIGETVAGNAFKMGPGGKGSNQAVAAARA---GADVVFVTR 66

Query: 64  LGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVAD-NGENAIGIAAGANAHLTP 122
           +G D+ G   R +W  +GI A   +++D  STG A IFV D  G+NAI +A+GA   +  
Sbjct: 67  IGNDAFGAIARSTWDAEGITARA-SVIDGASTGAAHIFVDDITGKNAIIVASGAAGMMNA 125

Query: 123 LELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPAATQELDYLKWVD 182
            +++   A  A+A+  + QLE P       L++A++ G+TTV NPAPA   +       D
Sbjct: 126 GDVDAIEADIASARVFVTQLEQPVSAARRGLEVARKHGVTTVFNPAPALPLDDSIFPLCD 185

Query: 183 IITPNETEAEALTGIEVKHEEDAKLAAQWLHQQGITTVVITLGSKGAFISSPGFTGLIPA 242
            ITPNE+E  ALTGIEV++ +DA+ AA  L ++G+  V++TLG  GA + S   +  +PA
Sbjct: 186 YITPNESETAALTGIEVRNVDDARRAADVLLKKGVRNVIVTLGEAGALLHSAEQSVFVPA 245

Query: 243 LTV-QAIDTVAAGDTFNGALVVGLSEGMSIAAAVSFANAASAITVTREGAQRAIPYRSEV 301
               + ++T  AGD F G     L+ G     A+ F  A + I+VTR G   ++P  +EV
Sbjct: 246 FQCGRVVETAGAGDGFTGGFAAALARGTDAVEAMRFGCALAGISVTRPGTAPSMPMLAEV 305

Query: 302 S 302
           +
Sbjct: 306 N 306