Pairwise Alignments

Query, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 308 a.a., ribokinase from Pectobacterium carotovorum WPP14

 Score =  260 bits (664), Expect = 3e-74
 Identities = 141/298 (47%), Positives = 192/298 (64%), Gaps = 3/298 (1%)

Query: 4   ILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDFICH 63
           ++V+GS NADH++N E  P PG+T+    Y +  GGKGANQAVA  R     + + FI  
Sbjct: 6   LVVLGSINADHILNLEQFPRPGETVIGEQYSVAFGGKGANQAVAAGR---SGADIAFIAC 62

Query: 64  LGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVADNGENAIGIAAGANAHLTPL 123
           +G+D IG  +     KD I    +  +   +TG A+IFV  + EN I I AGANA ++P 
Sbjct: 63  VGEDDIGTRICQQLSKDNIDVSAVEAISGETTGVALIFVNADAENMIAINAGANAAVSPD 122

Query: 124 ELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPAATQELDYLKWVDI 183
            L++H     +A  LL+QLE+P ETV  A ++A       +LNPAPA     + L  V++
Sbjct: 123 YLDRHQQHIIDASALLMQLESPLETVIAAAKLAHEHQTKVILNPAPARELPDELLSLVNM 182

Query: 184 ITPNETEAEALTGIEVKHEEDAKLAAQWLHQQGITTVVITLGSKGAFISSPGFTGLIPAL 243
           ITPNETEA+ LTGI V+ E+DA  AAQ LH +GI TV+ITLGS+G ++S  G    IP  
Sbjct: 183 ITPNETEAQFLTGITVETEDDAARAAQVLHDKGIETVLITLGSRGVWLSENGQGQRIPGY 242

Query: 244 TVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVSFANAASAITVTREGAQRAIPYRSEV 301
            V+A+DT+AAGDTFNGALV  L E   +++AV FA+AA+AI VTR GAQ ++P+R E+
Sbjct: 243 RVKAVDTIAAGDTFNGALVTALLENKPMSSAVKFAHAAAAIAVTRRGAQPSVPWREEI 300