Pairwise Alignments

Query, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 308 a.a., ribokinase from Serratia liquefaciens MT49

 Score =  272 bits (695), Expect = 8e-78
 Identities = 146/298 (48%), Positives = 196/298 (65%), Gaps = 3/298 (1%)

Query: 4   ILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDFICH 63
           ++V+GS NADH++N E  P PG+T+  + Y++  GGKGANQAVA  R     + + FI  
Sbjct: 6   LVVLGSINADHILNIEQFPRPGETVIGKQYKVAFGGKGANQAVAAGR---SGADIAFIAC 62

Query: 64  LGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVADNGENAIGIAAGANAHLTPL 123
           +G D IG  +R     D I  + I  + + +TG A+IFV   GEN IGI AGANA +TP 
Sbjct: 63  VGADDIGERVRQQLASDRIDTQPIEAIADSTTGVALIFVNAEGENVIGIDAGANAAVTPD 122

Query: 124 ELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPAATQELDYLKWVDI 183
            L ++     +A  LL+QLE+P ETV  A  +AK+     +LNPAPA     + L  +D+
Sbjct: 123 YLARYQQKVIDADALLMQLESPLETVIAAASLAKQHQTQVILNPAPARELPDELLATIDM 182

Query: 184 ITPNETEAEALTGIEVKHEEDAKLAAQWLHQQGITTVVITLGSKGAFISSPGFTGLIPAL 243
           ITPNETEA+ LTGI V  + DA  AAQ LH +GI TV+ITLGS+G ++S  G   L+P  
Sbjct: 183 ITPNETEAQRLTGIAVNDDNDAARAAQALHDKGIATVIITLGSRGVWLSENGNGKLVPGF 242

Query: 244 TVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVSFANAASAITVTREGAQRAIPYRSEV 301
            V+A+DT+AAGDTFNGALV  L EG ++A AV FA+AA+AI VTR GAQ ++P+R E+
Sbjct: 243 KVKAVDTIAAGDTFNGALVTALLEGKTMADAVRFAHAAAAIAVTRPGAQPSVPWREEI 300