Pairwise Alignments

Query, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 309 a.a., Ribokinase (EC 2.7.1.15) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  265 bits (678), Expect = 8e-76
 Identities = 140/299 (46%), Positives = 195/299 (65%), Gaps = 3/299 (1%)

Query: 3   HILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDFIC 62
           +++V+GS NADH++N E  P PG+T+    Y++  GGKGANQAVA  R     + + FI 
Sbjct: 6   NLIVLGSINADHILNLESFPTPGETVTGSHYQVAFGGKGANQAVAAGR---SGANIAFIA 62

Query: 63  HLGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVADNGENAIGIAAGANAHLTP 122
             G D IG+ +R   + D I    ++++   STG A+IFV   GEN IGI AGANA L+P
Sbjct: 63  CTGDDDIGDSIRKQLVSDRIDIAPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSP 122

Query: 123 LELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPAATQELDYLKWVD 182
             ++      A A  LL+QLE+P E+V  A ++A +   T  LNPAPA     + L  VD
Sbjct: 123 ALVDAQRERIAQADALLMQLESPLESVLAAAKIAHQHHTTVALNPAPARELPDELLALVD 182

Query: 183 IITPNETEAEALTGIEVKHEEDAKLAAQWLHQQGITTVVITLGSKGAFISSPGFTGLIPA 242
           IITPNETEAE LTG+ V++++DA  AAQ LH +GI TV+ITLGS+G + S  G    +P 
Sbjct: 183 IITPNETEAEKLTGVRVENDDDAAKAAQVLHDKGIRTVLITLGSRGVWASVDGEGRRVPG 242

Query: 243 LTVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVSFANAASAITVTREGAQRAIPYRSEV 301
            +V+A+DT+AAGDTFNGA +  + E   +  A+ FA+AA+AI VTR+GAQ ++P+R E+
Sbjct: 243 FSVEAVDTIAAGDTFNGAFITAILEETPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEI 301