Pairwise Alignments

Query, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 308 a.a., ribokinase from Dickeya dadantii 3937

 Score =  272 bits (696), Expect = 6e-78
 Identities = 144/298 (48%), Positives = 196/298 (65%), Gaps = 3/298 (1%)

Query: 4   ILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDFICH 63
           ++V+GS NADH++N    P PG+T+  + Y +  GGKGANQAVA  R     + ++FI  
Sbjct: 6   LVVLGSINADHILNLAQFPRPGETVIGKQYGVAFGGKGANQAVAAGR---SGADIEFIAC 62

Query: 64  LGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVADNGENAIGIAAGANAHLTPL 123
           +G D IG  +R   +KD I    +  +   +TG A+IFV    EN IGI AGANA +TP 
Sbjct: 63  VGADDIGERIRQQLIKDRIDVSAVEAISGQTTGVALIFVNGEAENMIGIHAGANAAVTPD 122

Query: 124 ELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPAATQELDYLKWVDI 183
            L ++     +A  LL+QLE+P ETV+ A ++A   G   +LNPAPA +   + L  VD+
Sbjct: 123 YLNRYQQKIIDASALLMQLESPLETVTAAARLAHDHGTKVILNPAPACSLPDELLSLVDM 182

Query: 184 ITPNETEAEALTGIEVKHEEDAKLAAQWLHQQGITTVVITLGSKGAFISSPGFTGLIPAL 243
           ITPNETEA+ LTG+ V+ E+DA+ AAQ LH +GI TV+ITLGS+G ++S  G    IP  
Sbjct: 183 ITPNETEAQILTGVAVETEDDAQRAAQVLHDKGIATVLITLGSRGVWLSEQGKGQRIPGF 242

Query: 244 TVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVSFANAASAITVTREGAQRAIPYRSEV 301
            V+A+DT+AAGDTFNGALV  L E   + AAV FA+AA+AI VTR GAQ ++P+R E+
Sbjct: 243 RVKAVDTIAAGDTFNGALVTALLESRPMEAAVKFAHAAAAIAVTRHGAQPSVPWREEI 300