Pairwise Alignments

Query, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 402 a.a., putative Ammonium transporter from Pseudomonas putida KT2440

 Score =  176 bits (445), Expect = 1e-48
 Identities = 138/397 (34%), Positives = 201/397 (50%), Gaps = 36/397 (9%)

Query: 11  DTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVVLYAIACVMYLLVGYNIMYV 70
           +T + L+   LV+ M AGFA LE G VR KN    L+K +  +AI+ ++Y  +GY I Y 
Sbjct: 16  NTLFILMGAILVLAMHAGFAFLEVGTVRHKNQVNALSKILSDFAISALVYFFIGYWIAYG 75

Query: 71  DNAEGGWLPSFGTLIGSQAADANHALESDFFFQVVFVATAMSIVSGAVAERMKLWAFLVF 130
            N        F     + A D  +AL   FF  + F A   +I+SG +AER +    L  
Sbjct: 76  VN--------FFQPATTLAVDHGYALVKCFFL-LTFAAAIPAIISGGIAERARFVPQLCA 126

Query: 131 SVVMTGIIYP-VEG-YWTWGKGFIASL------GFVDFAGSGIVHMTGAAAAIAGVLLLG 182
           + ++   +YP  EG  W    G  A L       F DFAGS +VH  G   A+A VLLLG
Sbjct: 127 TALIVAFVYPFFEGVVWNGNLGLQAWLQARFGAPFHDFAGSVVVHAMGGWLALAAVLLLG 186

Query: 183 ARKGKYGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANASAVAKVFVN 242
           AR+G+Y  +G++     S++P   LG +IL +GWFGFN     ++S          V +N
Sbjct: 187 ARRGRY-RDGRLVAFAPSSIPFLALGSWILIIGWFGFN-----VMSAQTLQGVSGLVAIN 240

Query: 243 TNTAAALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAGVIGLVAGG 302
           +  A   G +SAL+      G+ D   + NG LAGLVAI A       + A   GLVAG 
Sbjct: 241 SLMAMVGGTLSALLA-----GRNDPGFLHNGPLAGLVAICAGSDLMHPVGALATGLVAGA 295

Query: 303 LVVFSIVGL-DRIKIDDPVGAISVHGVAG-FLGLMC-----VPLSN-ANATITAQLTGAA 354
           L V++     +R KIDD +G   +HG+ G + G+ C     V L      ++ +QL G+ 
Sbjct: 296 LFVWTFTAAQNRWKIDDVLGVWPLHGLCGVWGGIACGVFGQVALGGMGGVSLVSQLLGSL 355

Query: 355 IIFAWVFSASFAVWFVLKMTMGIRVSEEEEYNGMDAS 391
           +      +  FAV+  ++   G+R+S E+E+ G D S
Sbjct: 356 MGVLVALAGGFAVYGAIRALHGLRLSHEQEFQGADLS 392