Pairwise Alignments

Query, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 425 a.a., ammonium transporter from Magnetospirillum magneticum AMB-1

 Score =  212 bits (539), Expect = 2e-59
 Identities = 148/414 (35%), Positives = 215/414 (51%), Gaps = 38/414 (9%)

Query: 11  DTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVVLYAIACVMYLLVGYNIMYV 70
           D  + L+   +V+ M +GFA LE G VR KN    L K +  +A++ ++Y  VGY++ Y 
Sbjct: 9   DVLFILLGAVMVLAMHSGFAFLEVGTVRKKNQVNALVKILSDFAVSTIVYFFVGYSVAYG 68

Query: 71  DNAEGGWLPSFGTLIGSQAADANHALESDFFFQVVFVATAMSIVSGAVAERMKLWAFLVF 130
                G     G   GS  A + + L   FFF   F A   +IVSG +AER K    L+ 
Sbjct: 69  TTFLVGADVLIGKT-GSAFAASGYDLVK-FFFLATFAAAIPAIVSGGIAERAKFTTQLMA 126

Query: 131 SVVMTGIIYPVEGYWTWG---------KGFIASLGFVDFAGSGIVHMTGAAAAIAGVLLL 181
           + V+ G++YP+     WG         KG+     F DFAGS +VH  G    +A VL+L
Sbjct: 127 TAVLVGLVYPLFEGMVWGTRFGFQDLMKGWFG-FAFHDFAGSVVVHAVGGWIGLAAVLML 185

Query: 182 GARKGKYGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANASAVAKVFV 241
           G R G+Y  +G++   P SN+P   LG ++L +GWFGFN  S  +++D +       V +
Sbjct: 186 GVRLGRYRKDGRLVAFPPSNIPFLALGAWVLSVGWFGFNVMSAQVIADISGL-----VAI 240

Query: 242 NTNTAAALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAGVIGLVAG 301
           N+  A   G +++L+V     G+ D   I NG LAGLVA+ A     S +M  V  LV G
Sbjct: 241 NSLMAMVGGIVTSLLV-----GRNDPGFIHNGALAGLVAVCAG----SDVMHPVGALVTG 291

Query: 302 GLVVFSIVGL-----DRIKIDDPVGAISVHGVAGFLGLMCVPLSNANA-------TITAQ 349
           G+     V L      + KIDD +G  ++HG+ GFLG +   +    A       ++ AQ
Sbjct: 292 GIAGAMFVWLFNLCQAKFKIDDVLGVWALHGMCGFLGGIACGVFGQEALGGLGGVSLGAQ 351

Query: 350 LTGAAIIFAWVFSASFAVWFVLKMTMGIRVSEEEEYNGMDASDCGIDAYPEFVT 403
           +TG  +  A+  +   AV+  LK T+GIR+S+EEE+ G D S   I AYPE  T
Sbjct: 352 VTGTVMGAAFGLAGGLAVYGGLKATLGIRLSDEEEFAGADLSIHQIGAYPEDAT 405