Pairwise Alignments

Query, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 449 a.a., ammonium transporter from Magnetospirillum magneticum AMB-1

 Score =  172 bits (436), Expect = 2e-47
 Identities = 125/405 (30%), Positives = 196/405 (48%), Gaps = 38/405 (9%)

Query: 12  TFYFLISGALVMWMAA-GFAMLEAGLVRSKNTTEILTKNVVLYAIACVMYLLVGYNIMYV 70
           T + L S ALV+ M   G A+  AG+VR KN    + ++  +  +  ++++++GY++ + 
Sbjct: 47  TAWMLTSTALVLMMTIPGLALFYAGMVRKKNLLGTMMQSFAITCVVTLLWVIIGYSLAFT 106

Query: 71  DNAEG-GWLPSF--GTLIGSQAADANHALESDFF-FQVVFVATAMSIVSGAVAERMKLWA 126
             +   G +  F    L  +  A  N   ES F  FQ+ F     ++++GA A+RMK  +
Sbjct: 107 GESPFIGGMERFLLNGLEKASLALPNPVPESVFMMFQMTFAIITPALITGAFADRMKFSS 166

Query: 127 FLVFSVVMTGIIYPVEGYWTW-------GKGFIASLGFVDFAGSGIVHMTGAAAAIAGVL 179
            LVF  +   ++Y    +W W         GF+  +G +DFAG  +VH+    A +   L
Sbjct: 167 MLVFMSLWLLVVYAPICHWVWMMDEKGTATGFLGKMGVLDFAGGTVVHINAGVAGLVACL 226

Query: 180 LLGARKGKYGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANASAVAKV 239
           +LG RKG YG +   N  P  NL ++ +G  +LW+GWFGFN GS +     A  +     
Sbjct: 227 ILGPRKG-YGTD---NMAP-HNLSLSIIGAALLWVGWFGFNAGSAVAADGRAGMAMAV-- 279

Query: 240 FVNTNTAAALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAGVIGLV 299
              T   AA  A+S +    ++  K     I++G +AGLVAIT       +  A VIGLV
Sbjct: 280 ---TQVGAAAAAVSWMFAEWLLRKKPSALGIISGAVAGLVAITPASGFVDVKGALVIGLV 336

Query: 300 AGGLVVFSIVGLDR-IKIDDPVGAISVHGVAGFLGLMCVPL--------------SNANA 344
           AG +  +   GL   +K DD + A  VHG+ G +G +   +               NA  
Sbjct: 337 AGVVCYWGATGLKHALKYDDSLDAFGVHGIGGIVGAILTGVFAVEKIGGTAGLLEGNAGQ 396

Query: 345 TITAQLTGAAIIFAWVFSASFAVWFVLKMTMGIRVSEEEEYNGMD 389
            +T Q+ G      +    SF +   + M MG+RV+ EEE  G+D
Sbjct: 397 VMT-QVYGVLTTLVYTAVVSFILLKAIDMVMGLRVTAEEEREGLD 440