Pairwise Alignments

Query, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 428 a.a., ammonium transporter AmtB from Serratia liquefaciens MT49

 Score =  191 bits (484), Expect = 5e-53
 Identities = 132/406 (32%), Positives = 202/406 (49%), Gaps = 28/406 (6%)

Query: 11  DTFYFLISGALVMWMAA-GFAMLEAGLVRSKNTTEILTKNVVLYAIACVMYLLVGYNIMY 69
           D  + +I  ALV++M   G A+   GL+RSKN   +LT+  V +A+ CV+++L GY++ +
Sbjct: 31  DNAFMMICTALVLFMTLPGVALFYGGLLRSKNVLSMLTQVTVTFALVCVLWVLYGYSLAF 90

Query: 70  VDNAE--GGWLPSFGTLIGSQAADANHALESDFFFQVVFVATAMSIVSGAVAERMKLWAF 127
            +     GG+  +    IG  +     +      FQ  F    +++V G  AER++  A 
Sbjct: 91  SEGNAFFGGFQTAMLKGIGIDSVTGTFSQMIHVAFQCSFACITVALVVGGFAERIRFSAV 150

Query: 128 LVFSVVMTGIIYPVEGYWTWGKGFIASLGFVDFAGSGIVHMTGAAAAIAGVLLLGARKGK 187
           ++F+ +   I Y    +  WG GF+A+ G +DFAG  +VH+  A+A + G  LLG R G 
Sbjct: 151 VIFAAIWFTISYLPIAHMVWGGGFLAADGALDFAGGTVVHINAASAGLVGAYLLGKRAG- 209

Query: 188 YGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANASAVAKVFVNTNTAA 247
           +G           NLPM   G  IL++GWFGFN GS    + AAN  A A  F+NT  A 
Sbjct: 210 FGKEA----FKPHNLPMVFTGASILYIGWFGFNAGS----ASAANGIA-ALAFLNTVVAT 260

Query: 248 ALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAGVIGLVAGGLVVFS 307
           A   +S      ++ GK  L    +G +AGLVAIT    +  +  A +IGLV G   ++ 
Sbjct: 261 AGAILSWTFAEWIVRGKPSLLGACSGCIAGLVAITPAAGTVGVGGALIIGLVGGIAGLWG 320

Query: 308 IVGLDR-IKIDDPVGAISVHGVAGFLGLMCVPLSNANA--------------TITAQLTG 352
           +V L + +K+DD      VHGV G +G +   +  + +               +  QL  
Sbjct: 321 VVTLKKWLKVDDTCDVFGVHGVCGIVGCLLTGVFTSASLGGTGYAEGVTMGHQVWIQLLS 380

Query: 353 AAIIFAWVFSASFAVWFVLKMTMGIRVSEEEEYNGMDASDCGIDAY 398
             I   W   A+F  + V    +G+RV EE+E  G+D +  G  AY
Sbjct: 381 VVITLVWSGVAAFIAFKVAGAIVGLRVPEEQEREGLDVNSHGESAY 426