Pairwise Alignments

Query, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 426 a.a., ammonium transporter from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  180 bits (456), Expect = 8e-50
 Identities = 128/396 (32%), Positives = 201/396 (50%), Gaps = 34/396 (8%)

Query: 18  SGALVMWMAA-GFAMLEAGLVRSKNTTEILTKNVVLYAIACVMYLLVGYNIMYVDNAEGG 76
           S ALV+ M   G A+   G+VR KN    +T++V ++A+  +++ + GY++ +  N   G
Sbjct: 35  STALVLLMTLPGLALFYGGMVRKKNVIATITQSVGVFAVVSLVWFVAGYSLAFGKNESAG 94

Query: 77  WLPSFGTLI-----GSQAADANHALES--DFFF---QVVFVATAMSIVSGAVAERMKLWA 126
             P  G+L      G     AN  L    +F F   Q+ F     ++++GA AER K  A
Sbjct: 95  LQPFIGSLDMLFLNGVSLKTANALLPGIPEFLFISFQMTFAIITPALITGAFAERFKYSA 154

Query: 127 FLVFSVVMTGIIYPVEGYWTWGKGFIASLGFVDFAGSGIVHMTGAAAAIAGVLLLGARKG 186
            L+F+ + + ++Y    +W WG GF+ S G +DFAG  +VH+    A +   + LG RKG
Sbjct: 155 LLLFTALWSLLVYAPICHWVWGGGFLGSAGVLDFAGGAVVHVNSGVAGLVCAIFLGRRKG 214

Query: 187 KYGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANASAVAKVFVNTNTA 246
            YG       I   N  +  +G  +L +GW GFN GS    + AAN   +    +NT  A
Sbjct: 215 -YG----TEVITAHNPVLTMIGASLLLVGWIGFNAGS----AGAAN-DLMGVALLNTILA 264

Query: 247 AALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAGVIGLVAGGLVVF 306
           AA  A++  +V  +   K  L  +L+G++AGLVAIT          A +IGL+AG     
Sbjct: 265 AAAAALTWKVVEYIEKKKVSLIGVLSGVVAGLVAITPAAGFVDPKGAVIIGLIAGPACYA 324

Query: 307 SIVGLDR-IKIDDPVGAISVHGVAGFLGLM--------CVPLSNANATITAQLTGAAIIF 357
           S V + + ++ DD + A  +HG  G +G +         +   +  A + AQ  G  +++
Sbjct: 325 SSVWIKKLLRYDDSLDAFGIHGAGGLIGALLTGVFATTAINSLSEGANVGAQALG--LLW 382

Query: 358 AWVFSA--SFAVWFVLKMTMGIRVSEEEEYNGMDAS 391
             V+SA  +  + F+ K T G+RVSE EE  G+D S
Sbjct: 383 TIVYSAVGTLIILFICKFTTGLRVSEAEEAAGLDTS 418