Pairwise Alignments

Query, 596 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 898 a.a., ATP-binding cassette domain-containing protein from Paraburkholderia sabiae LMG 24235

 Score =  492 bits (1267), Expect = e-143
 Identities = 263/581 (45%), Positives = 376/581 (64%), Gaps = 6/581 (1%)

Query: 18  VIKLLWPYLLEYKGRVALAMSCLIVAKLASVGLPFILKDVVDTLDANKTAQTLSVPIGLV 77
           +++ L   +L Y+   A++ + +I AKL++V +P  LK +VD L   ++      P+ LV
Sbjct: 16  IVRDLLAAVLRYRLVTAVSFALMIFAKLSAVAIPLTLKHIVDELSHPESPVVF--PVFLV 73

Query: 78  LAYGAVRLLTVITGEIRDTLFGRVTERAIRRLGLAVFDHLHRLDLDFHLERRTGGLSRDI 137
           LAY  +R       E RD +F  VT+R +       F HLHRL   FH +R TGG+ RD+
Sbjct: 74  LAYALLRFFADALNEARDVVFSVVTQRTVAEFAERTFGHLHRLGARFHAQRETGGVVRDV 133

Query: 138 ERGTSGVSFLMRFMVFNIVPTLLEIAMVIGIFFFNYGVAFASITFISVLAYIWFSVIATE 197
           ++GT G+ FL+   +F+IVPT +EI  ++ I    Y   F  I   +   Y  ++ + T+
Sbjct: 134 QKGTDGIGFLLGTALFSIVPTFIEIGSIVAIVMRGYSWLFTIIIAATFACYALYTYVFTQ 193

Query: 198 WRTEYVRDAAKADSLSNTRAIDSLLNYETVKYFNNEKYESERYDQALDQWEVAKRKNRLS 257
            R    R     ++ S+ R +DSLLNY++VK+F  E+ E+ R    L QW  A+  N+ +
Sbjct: 194 RRLVIQRRVNAIEAQSDGRLVDSLLNYDSVKFFATEETETRRQSDVLAQWIDARIANQRA 253

Query: 258 LFALNGGQALIIAIAMTAMMALAAYKVTHNEMTLGDFVLINAFMMQLFMPLNFLGFVYRE 317
           L AL+ GQ+ +IA  + A++ LA  KV    MT+GD VLINA+++Q+ MPLN LGFV+RE
Sbjct: 254 LTALHVGQSGVIATGIAAVVLLAVQKVMTGSMTVGDLVLINAYIIQVCMPLNTLGFVFRE 313

Query: 318 IRGALANIERMFSLLDKHP---SIVDKPDALDFEPKRGELSFENVSFSYDD-RPILRNVS 373
              A  N+ERMF++L         +D PDA       G + FE V+F YD  R +LR+VS
Sbjct: 314 TNDAKVNVERMFAILVARGVPGEDLDMPDARPLVVTDGGIEFERVNFGYDPARQVLRDVS 373

Query: 374 FKVAAGKKVAVVGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIRQLTQDALRRAIAIVP 433
           F++  G ++AVVG SG+GKSTL++LLFR Y    GR+LIDGQD+R +TQ +LR AI IVP
Sbjct: 374 FRIHPGNRLAVVGGSGSGKSTLVRLLFRIYQPASGRVLIDGQDLRAVTQKSLREAIGIVP 433

Query: 434 QDTVLFNDSLVENIRYGRPNASDDDVRHAIKLAHLEDFIASLSQGWDTKVGERGLKLSGG 493
           QDTVLFN+++  NI YGR  A+  DV  A + A L+ FI  L   +DT+VGERG++LSGG
Sbjct: 434 QDTVLFNETIAYNIAYGRQGATRADVVRAARAAQLDGFIERLPDHYDTRVGERGVRLSGG 493

Query: 494 EKQRVAIARAILKGSPVLVFDEATSSLDSRSEQAILSALREVAKGHTSLVVAHRLSTIVD 553
           E+QR+AIARAILK   ++VFDEA+S+LD+RSE+AI + L+ +A+G TS+ +AHRLST+VD
Sbjct: 494 ERQRIAIARAILKNPRIIVFDEASSALDTRSERAIQNELKRLAQGRTSISIAHRLSTVVD 553

Query: 554 ADQIVVLSKGEIVEQGNHSSLLAQDGLYAKLWRIQNEQQHL 594
           AD I+V+  G IVEQG H +LLA+  +YAK+W +Q +Q  L
Sbjct: 554 ADWILVMEHGRIVEQGTHDALLARGAVYAKMWALQWQQGEL 594