Pairwise Alignments

Query, 596 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 613 a.a., ABC transporter ATP-binding protein/permease from Magnetospirillum magneticum AMB-1

 Score =  611 bits (1575), Expect = e-179
 Identities = 319/586 (54%), Positives = 425/586 (72%), Gaps = 10/586 (1%)

Query: 15  NWHVIKLLWPYLLE-----YKGRVALAMSCLIVAKLASVGLPFILKDVVDTLDANKTAQT 69
           +W  ++ L+PYL        + RV  AM  L+ AK   VG+P + K  VDTL A+     
Sbjct: 20  DWTTLRTLFPYLWPPGEAGLRLRVVAAMILLVAAKGVGVGIPLLYKQAVDTLSASPVL-- 77

Query: 70  LSVPIGLVLAYGAVRLLTVITGEIRDTLFGRVTERAIRRLGLAVFDHLHRLDLDFHLERR 129
             VP+ L++AYGA R++     E+RD +F +V +RAIR++GL VF HLHRL L FHL+R+
Sbjct: 78  --VPLALLVAYGAARVMAGSFAELRDIVFVKVAQRAIRKVGLGVFTHLHRLGLRFHLDRQ 135

Query: 130 TGGLSRDIERGTSGVSFLMRFMVFNIVPTLLEIAMVIGIFFFNYGVAFASITFISVLAYI 189
           TGG+SR IERGT G+ FL+ FM+FNI+PTLLEI +V  I +  Y   FA IT +++  YI
Sbjct: 136 TGGVSRAIERGTKGIEFLLNFMLFNILPTLLEIGLVTAILWGLYDGVFALITAVTIAVYI 195

Query: 190 WFSVIATEWRTEYVRDAAKADSLSNTRAIDSLLNYETVKYFNNEKYESERYDQALDQWEV 249
            F++  TEWRT++ R   + DS ++T+AIDSLLN+ETVKYF NE +E+ RYD+AL ++E 
Sbjct: 196 AFTLGVTEWRTKFRRAMNETDSEASTKAIDSLLNFETVKYFCNEAHEAGRYDKALARYEH 255

Query: 250 AKRKNRLSLFALNGGQALIIAIAMTAMMALAAYKVTHNEMTLGDFVLINAFMMQLFMPLN 309
           A  K++++L  LN GQ  +IA+ +T +M  AA  V    MTLGDFVL+N++++QL++PLN
Sbjct: 256 AASKSKVTLSLLNMGQGAVIAVGLTLVMIRAAQGVADGTMTLGDFVLVNSYLIQLYLPLN 315

Query: 310 FLGFVYREIRGALANIERMFSLLDKHPSIVDKPDALDFEPKRGELSFENVSFSYD-DRPI 368
           FLGFVYREI+ +L ++E MF LL ++  I D P A     + GE+ FE VSF Y+ DR I
Sbjct: 316 FLGFVYREIKQSLTDMESMFRLLRENAEIEDAPGAGPLALQGGEVRFEAVSFGYNPDRRI 375

Query: 369 LRNVSFKVAAGKKVAVVGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIRQLTQDALRRA 428
           L  V F V AGK +A+VG SGAGKST+ +LLFRFYDV++GRI+IDG DIR +TQ +LR A
Sbjct: 376 LGGVDFTVPAGKTLAIVGPSGAGKSTISRLLFRFYDVDEGRIVIDGADIRDVTQSSLRAA 435

Query: 429 IAIVPQDTVLFNDSLVENIRYGRPNASDDDVRHAIKLAHLEDFIASLSQGWDTKVGERGL 488
           I IVPQDTVLFND++  NI YGRP AS D++  A +LA ++DF+ SL QG+DT+VGERGL
Sbjct: 436 IGIVPQDTVLFNDTIRYNIAYGRPGASQDEIEAAARLARIDDFVQSLPQGYDTRVGERGL 495

Query: 489 KLSGGEKQRVAIARAILKGSPVLVFDEATSSLDSRSEQAILSALREVAKGHTSLVVAHRL 548
           KLSGGEKQRVAIAR ILK   +L+FDEATS+LD+++E+ I  +LREV++  T+L+VAHRL
Sbjct: 496 KLSGGEKQRVAIARTILKQPAILIFDEATSALDTQTEKEIQESLREVSRNRTTLIVAHRL 555

Query: 549 STIVDADQIVVLSKGEIVEQGNHSSLLAQDGLYAKLWRIQNEQQHL 594
           ST+VDAD+IVVL  G IVE+G H+ LL  DG YA +WR Q E Q L
Sbjct: 556 STVVDADEIVVLEHGRIVERGRHARLLEADGRYAAMWRRQQEAQTL 601