Pairwise Alignments

Query, 596 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 627 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  294 bits (753), Expect = 7e-84
 Identities = 184/534 (34%), Positives = 301/534 (56%), Gaps = 33/534 (6%)

Query: 74  IGLVLAYGAVR-LLTVITGEIRDTLFGRVTERAIRRLGLAVFDHLHRLDLDFHLERRTGG 132
           +G+++  G VR ++T+IT  +   +   +T      +    + H+ R  L F     +G 
Sbjct: 93  VGMLVLIGVVRFIVTMITALVDQQI---ITPGFYNLVRWQSYMHVARQSLTFFQNDFSGR 149

Query: 133 LSRDIERGTSGVSFLMRFMVFNIVPTLLEIAMVIGIFFFNYGVAFASITF-ISVLAYIWF 191
           +   +  G             ++V +L+E    +GI+  +       + + ++VL  +W 
Sbjct: 150 IVTKVWSGGQAAG--------DLVTSLMESVWFVGIYSVSMLFLIGGLDWRLAVLVVVWV 201

Query: 192 SVIATEWR------TEYVRDAAKADSLSNTRAIDSLLNYETVKYFNNEKYESERYDQALD 245
           ++ +   R        + ++ A+A S+ + R +D+  N +T++ F  +        Q  D
Sbjct: 202 AIFSLLARYFVPRIRHHSKETAEAASMLSGRMVDAYSNIQTLRLFGRDDANDRYMRQGFD 261

Query: 246 QWEVAKRKNRLSLFALNGGQALIIAIAMTAMMALAAYKVTHNEMTLGDFVLINAFMMQLF 305
            ++ +  K    +  +    AL+  + +T+M AL        +++ G      AF + L 
Sbjct: 262 IFQTSTMKFTRFITGVRASMALLSGVMITSMAALCIDLWLSGKISSGAV----AFTLALV 317

Query: 306 MPLNFL-GFVYREIRGALAN---IERMFSLLDKHPSIVDKPDALDFEPKRGELSFENVSF 361
           + LNFL G +  +  G + N   ++    L+ +   +VD PDA   E K+  + FENVSF
Sbjct: 318 LRLNFLLGRLMTQFNGIMRNFGTVQNAAELISQPIGLVDAPDAAVLEVKKPSIRFENVSF 377

Query: 362 SYDD-RPILRNVSFKVAAGKKVAVVGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIRQL 420
            Y     ++ N++ ++ AG+KV +VG SGAGKSTL+ LL RFYDVE+GRILIDGQDI ++
Sbjct: 378 HYGRANGVIDNLNLEIRAGEKVGIVGRSGAGKSTLVNLLLRFYDVEKGRILIDGQDIARV 437

Query: 421 TQDALRRAIAIVPQDTVLFNDSLVENIRYGRPNASDDDVRHAIKLAHLEDFIASLSQ--- 477
           +Q++LR  I +V QDT L + S+ +NI +GR +A++  +  A + A  +DFI  L     
Sbjct: 438 SQESLRAHIGMVTQDTSLLHRSIRDNIMFGRTDATEAQLIEATRRAKADDFITRLEDQRG 497

Query: 478 --GWDTKVGERGLKLSGGEKQRVAIARAILKGSPVLVFDEATSSLDSRSEQAILSALREV 535
             G+D  VGERG+KLSGG++QR+AIAR +LK +P+LV DEATS+LDS  E AI S L E+
Sbjct: 498 RTGFDAHVGERGVKLSGGQRQRIAIARVMLKDAPILVLDEATSALDSEVEAAIQSNLDEL 557

Query: 536 AKGHTSLVVAHRLSTIVDADQIVVLSKGEIVEQGNHSSLLAQDGLYAKLWRIQN 589
            +G T L +AHRLSTI   D+++V+ +G IVE+G+H+ L+AQ GLY++LW  Q+
Sbjct: 558 MQGKTVLAIAHRLSTIAALDRLIVMDQGLIVEEGSHAELVAQGGLYSELWARQS 611