Pairwise Alignments

Query, 596 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 577 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  293 bits (749), Expect = 2e-83
 Identities = 195/575 (33%), Positives = 294/575 (51%), Gaps = 11/575 (1%)

Query: 18  VIKLLWPYLLEYKGRVALAMSCLIVAKLASVGLPFILKDVVDTL-DANKTAQTLSVPIGL 76
           +++  + Y   Y+G   L  SC +++ +  +G P  +K  VD L    +    L+  +GL
Sbjct: 1   MLRRFFAYYRPYRGLFILDFSCAVLSGVLELGFPMAVKAFVDVLLPGGQWGIILAASVGL 60

Query: 77  VLAYGAVRLLTVITGEIRDTLFGRVTERAIRRLGLAVFDHLHRLDLDFHLERRTGGLSRD 136
           ++ Y  +    + T      + G   E  +RRL    FDHL +L   +   ++TG L   
Sbjct: 61  LVIY-VLNTGLMATVTYWGHMLGINIETDMRRLA---FDHLQKLSFRYFDNQKTGHL--- 113

Query: 137 IERGTSGVSFLMRFMVFNIVPTLLEIAMVIGIFFF--NYGVAFASITFISVLAYIWFSVI 194
           + R T  +  +            + I   IG F    +  V  A +T   V    W +  
Sbjct: 114 VGRLTKDLEEIGEVAHHGPEDLFIAIMTFIGAFLLMMSVNVQLALVTAAVVPVTAWVTSR 173

Query: 195 ATEWRTEYVRDAAKADSLSNTRAIDSLLNYETVKYFNNEKYESERYDQALDQWEVAKRKN 254
                T+  R         N R  +++     V+ F NE +E   +++   ++   K   
Sbjct: 174 YGGRMTQNFRALYGRVGDFNARIEENVGGMRVVQAFANEDHERSLFEKDNQKYRRTKLDA 233

Query: 255 RLSLFALNGGQALIIAIAMTAMMALAAYKVTHNEMTLGDFVLINAFMMQLFMPLNFLGFV 314
              + A      + + +    +M   A+ V +  +T G FV     +   F P+  +  V
Sbjct: 234 YKIMAASTSLSYMSMRLTQMIVMICGAWFVLNGSLTEGGFVGFLLLVGVFFRPVEKINSV 293

Query: 315 YREIRGALANIERMFSLLDKHPSIVDKPDALDFEPKRGELSFENVSFSY-DDRPILRNVS 373
                  +A   R   LLD  P IVD PDA+D     G + + +V F Y + + +L N+ 
Sbjct: 294 IETYPKGIAGFRRFTELLDTAPDIVDAPDAIDAPALSGAIEYRHVGFGYAEGKRVLDNID 353

Query: 374 FKVAAGKKVAVVGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIRQLTQDALRRAIAIVP 433
            K++AG+ VA VG SGAGK+TL  LL RFYDV  G I IDG DIR++   +LR  I IV 
Sbjct: 354 LKISAGETVAFVGPSGAGKTTLCSLLPRFYDVTSGSITIDGIDIRKMKLASLRNQIGIVQ 413

Query: 434 QDTVLFNDSLVENIRYGRPNASDDDVRHAIKLAHLEDFIASLSQGWDTKVGERGLKLSGG 493
           QD  LF  ++ ENI YGR  ASD+++  A + A L+  I ++  G DT +GERG+KLSGG
Sbjct: 414 QDVFLFGGTIRENIEYGRLGASDEEIMDAARRARLDGVIEAMPLGLDTVIGERGVKLSGG 473

Query: 494 EKQRVAIARAILKGSPVLVFDEATSSLDSRSEQAILSALREVAKGHTSLVVAHRLSTIVD 553
           +KQR+AIAR  LK  P+L+ DEATS+LD+ +E+AI  +L E+AKG T+LV+AHRL+TI D
Sbjct: 474 QKQRLAIARMFLKNPPILILDEATSALDTETERAIQQSLTELAKGRTTLVIAHRLATIRD 533

Query: 554 ADQIVVLSKGEIVEQGNHSSLLAQDGLYAKLWRIQ 588
           A +IVV+ +  I E G H+ LLA  G Y++L   Q
Sbjct: 534 ASRIVVVDQTGIAETGAHAELLAAKGHYSRLHEAQ 568