Pairwise Alignments

Query, 596 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 628 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  565 bits (1457), Expect = e-165
 Identities = 294/580 (50%), Positives = 395/580 (68%), Gaps = 11/580 (1%)

Query: 22  LWPYLL-----EYKGRVALAMSCLIVAKLASVGLPFILKDVVDTLD-----ANKTAQTLS 71
           LWPY+      + K RV  A   LIVAKL  + +P+  K   D L+     A      L 
Sbjct: 22  LWPYMWPEGRWDLKMRVIWATVFLIVAKLVLIAVPYFFKWATDALNGKLDMAGLVPAFLL 81

Query: 72  VPIGLVLAYGAVRLLTVITGEIRDTLFGRVTERAIRRLGLAVFDHLHRLDLDFHLERRTG 131
             + LV+AY   RL+ V   ++RD+LF  V + A+R+L    F H+HRL L FHLER+TG
Sbjct: 82  GAVALVIAYNLTRLIQVGLNQLRDSLFASVGQHAVRQLAYRTFVHMHRLSLRFHLERKTG 141

Query: 132 GLSRDIERGTSGVSFLMRFMVFNIVPTLLEIAMVIGIFFFNYGVAFASITFISVLAYIWF 191
           GLSR IERGT G+  ++RF + N  PT +E  +   IF+ +YG ++  +T ++V AYIWF
Sbjct: 142 GLSRVIERGTKGIETIVRFTILNTAPTFIEFLLTAIIFWASYGFSYVLVTVVTVWAYIWF 201

Query: 192 SVIATEWRTEYVRDAAKADSLSNTRAIDSLLNYETVKYFNNEKYESERYDQALDQWEVAK 251
           +V A+ WR    R    +D+ +NT+AIDSLLN+ETVKYF NE+ E+ R+D A++++E + 
Sbjct: 202 TVRASNWRIGIRRAMNDSDTDANTKAIDSLLNFETVKYFGNEEMEARRFDVAMERYEKSA 261

Query: 252 RKNRLSLFALNGGQALIIAIAMTAMMALAAYKVTHNEMTLGDFVLINAFMMQLFMPLNFL 311
                SL  LN GQ +I  I  T MM ++A  V   E T+GDFV +NA ++QL +PLNF+
Sbjct: 262 ISIWTSLGWLNFGQGVIFGIGSTIMMVMSALAVQRGEQTIGDFVFVNALLLQLSVPLNFI 321

Query: 312 GFVYREIRGALANIERMFSLLDKHPSIVDKPDALDFEPKRGELSFENVSFSYD-DRPILR 370
           GFVYREIR  L +IE+MF LL+    + D+PDA       G +SF +V F+YD +RPIL+
Sbjct: 322 GFVYREIRQGLTDIEQMFDLLEVEAEVTDRPDAKPLAAGPGAISFRDVHFAYDPERPILK 381

Query: 371 NVSFKVAAGKKVAVVGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIRQLTQDALRRAIA 430
            VSF V AGK VA+VG SGAGKST+ +LL+RFYD+++G + IDGQDIR +TQ +LR  I 
Sbjct: 382 GVSFDVPAGKTVAIVGPSGAGKSTISRLLYRFYDIQEGAVTIDGQDIRDVTQKSLRSMIG 441

Query: 431 IVPQDTVLFNDSLVENIRYGRPNASDDDVRHAIKLAHLEDFIASLSQGWDTKVGERGLKL 490
           +VPQDTVLFND+L  NIRYGRP+A+D++++ A   A +  FI  L  G+ T VGERGLKL
Sbjct: 442 MVPQDTVLFNDTLAYNIRYGRPSATDEELKAAADAAQISAFIGKLPDGYATMVGERGLKL 501

Query: 491 SGGEKQRVAIARAILKGSPVLVFDEATSSLDSRSEQAILSALREVAKGHTSLVVAHRLST 550
           SGGEKQRVAIAR ILK  P+L+ DEATS+LD+ +EQ I SAL  V+K  T+LV+AHRLST
Sbjct: 502 SGGEKQRVAIARTILKAPPILILDEATSALDTHTEQEIQSALDIVSKNRTTLVIAHRLST 561

Query: 551 IVDADQIVVLSKGEIVEQGNHSSLLAQDGLYAKLWRIQNE 590
           ++ AD+I+VL +G I E+G H+SL+A DGLYA +W  Q E
Sbjct: 562 VIHADEIIVLKEGLIAERGTHASLMAHDGLYASMWSRQRE 601