Pairwise Alignments

Query, 544 a.a., iron(III) ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 538 a.a., iron ABC transporter permease from Pseudomonas simiae WCS417

 Score =  412 bits (1060), Expect = e-119
 Identities = 227/532 (42%), Positives = 333/532 (62%), Gaps = 8/532 (1%)

Query: 7   RSWSLTGYAIAVLLVLPLLALLLQAAQPDEAVFGHLLSTVLPTYIANSLWLILWVSIGSL 66
           R W L  + +A L++LPL  LLL     D  ++ HL  T +P  + N+L L+  V +G  
Sbjct: 7   RRWYLPVFTVAALVLLPLSVLLLSWQSIDAQIWSHLWETQMPRLLGNTLTLVSGVGVGVT 66

Query: 67  LLALPCAWLMARCEFVGRRYLQWALLLPLAMPAYIVAYVYTDLLDYAGPVQRSLRALFGW 126
           +L +  AWL + CEF GRR+L WAL+LP A+PAY++A+V+  LLD++GPVQ  LR  FG 
Sbjct: 67  VLGVSLAWLTSLCEFPGRRWLDWALMLPFAIPAYVLAFVFVGLLDFSGPVQTLLREWFGT 126

Query: 127 SSPQDYFFPDIRTLGGAACVLSLVLFPYIYLLARTAFMEQSLNLAHASRIMGCSPWQSFW 186
                   P +R+ GG   VL LV +PY+YLLARTAF+ Q   L  A+R++G SPW++FW
Sbjct: 127 GLR----LPRVRSTGGVIIVLVLVFYPYVYLLARTAFLAQGKGLMEAARVLGQSPWRAFW 182

Query: 187 RLSLPMARPALAVGVALVAMETAADFATVNYFAVPTLTTAVYDTWLGYGNLTAAAKLSAI 246
            ++LPMARPA+  GVAL  MET ADF  V+ F   T TTA+Y TW G+ +L++AA+L+++
Sbjct: 183 HVALPMARPAIGAGVALALMETLADFGAVSVFNFDTFTTAIYKTWYGFFSLSSAAQLASL 242

Query: 247 ILLVVFSLIGVERFARRKQQLFQKQSRIQAIDLYRLSPMQTLLGLGYCGMLLLLAFVLPS 306
           +LLVV  ++  ER AR   +   ++ R +A  LYRL   +     G+CG++   AFV+P 
Sbjct: 243 LLLVVMLVLYGERRARGASRPSNERPRGKA--LYRLRGFKAAAASGWCGLVFACAFVIPM 300

Query: 307 GILLSYAINYFEQSWDPLFWQLSVNSLTLALITSLVCCVIALVLMFIRRVSPRSSDALPS 366
             L+ +         D  +  L +++L L  I +L+   +ALVL F  R++P  +     
Sbjct: 301 LQLVVWFWQRGRFDLDERYSGLIIHTLYLGGIAALITVSVALVLAFANRLAPTRAIRSGI 360

Query: 367 RLASTGYALPGTVLAIGVLVPLTLLD-FAINDIADWLGMAGPGLLLTGSTVALVFAFCVR 425
            LA+ GYALPG+VLA+ +++  + LD   +  ++ W G AG  LLL GS  ALV A+ VR
Sbjct: 361 SLANVGYALPGSVLAVSIMLAFSYLDRELVVPLSGWFGGAGKPLLL-GSLSALVLAYLVR 419

Query: 426 FVAIAIGSVESSYKRISPSLDMVSLTLGQSPRRLLQRVHLPLLTKGLFAGALLVFIESMK 485
           F+A+A G +E+S  RI PSL   + +LG    RL  +V+LPLL  G  + ALLVF++ +K
Sbjct: 420 FLAVAYGPLENSLARIRPSLPEAARSLGVCGPRLFCKVYLPLLLPGTLSAALLVFVDVLK 479

Query: 486 ELPAALLLRPIGFENLATYVFQFVSDEKLEHGALPAIVIVLVGLVPLIYLNR 537
           E+PA LL+RP G++ LA  +F+  S+ +    +LPA+ +VLVGL+P+I L R
Sbjct: 480 EMPATLLMRPFGWDTLAVRIFEMTSEGEWARASLPALTLVLVGLLPVIELIR 531