Pairwise Alignments

Query, 544 a.a., iron(III) ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 565 a.a., iron ABC transporter permease from Pectobacterium carotovorum WPP14

 Score =  343 bits (880), Expect = 1e-98
 Identities = 207/535 (38%), Positives = 311/535 (58%), Gaps = 13/535 (2%)

Query: 11  LTGYAIAVLLVLPLLALLLQAAQPDEAVFGHLLSTVLPTYIANSLWLILWVSIGSLLLAL 70
           +    IA+ ++ PL++LL  AA      + HL+  VLP    N+L L++ V    +++  
Sbjct: 28  IAAVVIALGVLAPLVSLLWLAAGAGVGHWDHLMRYVLPDAALNTLILLVGVGALVMVIGA 87

Query: 71  PCAWLMARCEFVGRRYLQWALLLPLAMPAYIVAYVYTDLLDYAGPVQRSLRALFGWSSPQ 130
            CAWL+   +F GR+++ WALLLPLAMP YIVA+ + DLL   GP+Q ++R++ G+ SP+
Sbjct: 88  GCAWLVTAFDFPGRQFVSWALLLPLAMPTYIVAFAWLDLLHPIGPIQEAIRSVLGYDSPR 147

Query: 131 DYFFPDIRTLGGAACVLSLVLFPYIYLLARTAFMEQSLNLAHASRIMGCSPWQSFWRLSL 190
            +  PD+R++ GA  +L LVL+PY+YL  R  F+ Q  +L  A+R +G S   +F  ++L
Sbjct: 148 QFRLPDLRSMTGAILLLGLVLYPYVYLTMRAMFISQPAHLLEAARTLGLSATGTFLHVAL 207

Query: 191 PMARPALAVGVALVAMETAADFATVNYFAVPTLTTAVYDTWLGYGNLTAAAKLSAIILLV 250
           PMARPALAVG +L  +ET  D     +  V TLT  VY TW+   +L AAA+++  +L V
Sbjct: 208 PMARPALAVGTSLALLETLNDIGASEFLGVNTLTVTVYTTWVTRSDLPAAAQIACTMLTV 267

Query: 251 VFSLIGVERFARRKQQLFQKQSRIQAIDLYRLSPMQTLLGLGYCGMLLLLAFVLPSGILL 310
           V  L+ +E +  RK Q +    +++ I    L  ++  L  G   + +LL F+ P+  L 
Sbjct: 268 VILLLTLEYYG-RKNQRYGTSRQMRGILPAPLKGVRAWLATGATALPILLGFIAPALFLA 326

Query: 311 SYAINYFEQS--WDPLFWQLSVNSLTLALITSLVCCVIALVLMFIRR---VSPRSSDALP 365
             +      S        Q   NSL LA+  +LV   ++L++ +  R   ++ RS +   
Sbjct: 327 WESAKRLGDSVTISASLIQSLQNSLLLAVGVTLVVTFVSLIIAWYARHSAIADRSPERRR 386

Query: 366 S--RLASTGYALPGTVLAIGVLVPLTLLDFAINDIADWLGMAGPGLLLTGSTVALVFAFC 423
           +  R+AS GYA+PGTVLAIG+L P    D   N +A+ +G  G  LL  G  + LV    
Sbjct: 387 TLLRIASLGYAVPGTVLAIGMLTPGMATD---NFLAELIGYKGLPLLSAG--ILLVICCA 441

Query: 424 VRFVAIAIGSVESSYKRISPSLDMVSLTLGQSPRRLLQRVHLPLLTKGLFAGALLVFIES 483
           +RF+AI IG++++   RI P ++  S  LG+S      RVHLPLL   L   ALLVF ++
Sbjct: 442 IRFMAIGIGALDAGLTRIPPVMEQASRLLGESEFVTFFRVHLPLLRPALVTSALLVFADA 501

Query: 484 MKELPAALLLRPIGFENLATYVFQFVSDEKLEHGALPAIVIVLVGLVPLIYLNRS 538
           MKELPA LLLRP+ FE LAT ++   +    E GA+ A++IVL G +P++ L RS
Sbjct: 502 MKELPATLLLRPVNFETLATVLYAEAARGTYEEGAIAALLIVLAGTLPVVLLARS 556