Pairwise Alignments

Query, 544 a.a., iron(III) ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 535 a.a., iron ABC transporter permease from Dickeya dadantii 3937

 Score =  311 bits (797), Expect = 4e-89
 Identities = 201/540 (37%), Positives = 305/540 (56%), Gaps = 17/540 (3%)

Query: 9   WSLTGYAIAVLLVLPLLALLLQA-AQPDEAVFGHLLSTVLPTYIANSLWLILWVSIGSLL 67
           W ++   +A +L+ PL+ ++  A + P +AV    L   LP Y  NSL L++   + SLL
Sbjct: 6   WRISSVLLAGMLLFPLVTMVGMALSAPGDAVSA--LWHALPVYGINSLMLVVGCVLFSLL 63

Query: 68  LALPCAWLMARCEFVGRRYLQWALLLPLAMPAYIVAYVYTDLLDYAGPVQRSLRALFGWS 127
            ALP AWLM+R  F G+ +L  ALLLPLAMP Y++A VY D L Y GPV+++L AL   +
Sbjct: 64  FALPLAWLMSRYRFAGQVWLHRALLLPLAMPGYLLAAVYGDALGYEGPVKQTLYALSFDT 123

Query: 128 S--PQDYFFPDIRTLGGAACVLSLVLFPYIYLLARTAFMEQSLNLAHASRIMGCSPWQSF 185
              PQ ++   +  +  + C L+LVLFPY+YLL RTA M Q ++L  A+R+M  +  Q F
Sbjct: 124 DIVPQTFWQQALMVVCASLC-LALVLFPYVYLLVRTALMSQPVSLQQAARLMNQTRAQVF 182

Query: 186 WRLSLPMARPALAVGVALVAMETAADFATVNYFAVPTLTTAVYDTWLGYGNLTAAAKLSA 245
           WR+  PMARPA+A+G+ L+A E   D+    YF++ T+TTA  D W        AA L +
Sbjct: 183 WRVVFPMARPAIALGMVLMASEALGDYGISAYFSLQTITTAGLDLWRDKAQHGTAALLMS 242

Query: 246 IILLVVFSLIGVERFARRKQQLFQKQSRIQAIDLYRLSPMQTLLGLGYCGMLLLLAFVLP 305
           ++L +VF +    R +R +Q  +QK S +   ++  L      L + + G L+++AFV+P
Sbjct: 243 LLLPLVFLIWFQARRSRARQLRYQKNSGVYPQNVPVLRGWPRFLVMLFGGALVVIAFVVP 302

Query: 306 SGILLSYAINYFEQSWDPLFWQLSVNSLTLALITSLVCCVIALVLMFIRRVSPRSSDALP 365
            G L+ +AI      W   F     +S   A   +L+   +A+V  F  R     +   P
Sbjct: 303 VGRLVGWAILSEAPIWSLPFLLAFTSSFMAAACATLLVIGLAVVCTFDFRAIGNPAYRNP 362

Query: 366 SRLASTGYALPGTVLAIGVLVPLTLLDFAINDIADWLGMAGPGLL---LTGSTVALVFAF 422
            R  +    LP T L +G+LVP   LD        W   AG G++     GS + L+ A+
Sbjct: 363 LRWLNLNRLLPSTALGMGLLVPFLGLD-------AWHATAG-GVVDDPWAGSVLVLILAY 414

Query: 423 CVRFVAIAIGSVESSYKRISPSLDMVSLTLGQSPRRLLQRVHLPLLTKGLFAGALLVFIE 482
           C+RF  + I  ++    R+S +++ VS +LG +P   +  V+LP L   L  G LLVF E
Sbjct: 415 CMRFSGLLIDRLQIRMSRLSGAMNHVSQSLGYTPALQVLWVYLPQLRHCLIVGVLLVFTE 474

Query: 483 SMKELPAALLLRPIGFENLATYVFQFVSDEKLEHGALPAIVIVLVGLVPLIYLNRSLEQD 542
           S++EL A+LLL+P   E +ATYVF+F+ DE+L   A PA+++V VG++PL  + R +  +
Sbjct: 475 SLRELNASLLLQPFEVETMATYVFRFMMDERLPLVATPALMLVGVGMIPLFGITRLMRME 534