Pairwise Alignments

Query, 349 a.a., iron(III) ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 330 a.a., ABC transporter ATP-binding protein from Dickeya dadantii 3937

 Score =  230 bits (587), Expect = 3e-65
 Identities = 133/343 (38%), Positives = 205/343 (59%), Gaps = 23/343 (6%)

Query: 5   LNLHQVHSDYQGQQILKGLDLTLAQGEILALLGPSGCGKTTLLRAVAGLQAISQGEIQIN 64
           L++  ++  Y   ++ + +  +  +GE + LLGPSGCGK+TLLR +AGL ++  G+I + 
Sbjct: 4   LDVINLNKHYGPTRVFQDIQFSADEGEFVTLLGPSGCGKSTLLRCLAGLTSVDSGQILLQ 63

Query: 65  GKTVSGAGQFVPSEQRGIGMIFQDYALFPHLTVAENILFGVA--KLTTAQRKARLDDMLA 122
           G+ +      +  +QR IGM+FQ+YALFP++TV  N+ FG+   KL   + +AR+ ++LA
Sbjct: 64  GRDIVP----LSPQQRDIGMVFQNYALFPNMTVEGNVAFGLKMQKLPAGEIRARVAEVLA 119

Query: 123 LVKLEGLAKRYPHELSGGQQQRVSIARALAYEPQLLLLDEPFSNIDAQVRHSMMAEIRSI 182
           LV+L   A+RYPH+LSGGQ QRV++AR+L   P+LLLLDEP S +DA++R  +  +IR I
Sbjct: 120 LVELGDYARRYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRRHLREQIRRI 179

Query: 183 LKQRNVSAVFVTHSKDEAFVFADTLAIFSQGVIVQHGRAEDLYAAPNSRYVADFLGSGNY 242
            ++  ++A+FVTH ++EA   +D + + ++G IVQ+G AE LY  P S + A F+GS N 
Sbjct: 180 QQELKLTAIFVTHDQEEALTLSDRIVLMNKGEIVQNGDAESLYTQPASLFAAGFIGSYNL 239

Query: 243 LPAEVVDGHSVTTPIGQLRSLTPLSQSHAFNGQVFLRPQQLALSADDAGV-GTITERRFL 301
           L AE            Q  SLT       F+GQV LRP+ + L A + G+ G I     L
Sbjct: 240 LSAE------------QAMSLT----GGRFSGQVALRPESVLLCAPEQGLAGEIIGHSLL 283

Query: 302 GAFCHYWVKVEAASHAYYLEVRSQIMQFNVGQRVGLSTEPHSL 344
           G    Y V++     +  +  R+       G RVG+  +  +L
Sbjct: 284 GNVIRYRVRISEVELSVDVLNRAVTDLHPTGSRVGVQIDLSAL 326