Pairwise Alignments

Query, 349 a.a., iron(III) ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 346 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  226 bits (575), Expect = 9e-64
 Identities = 123/311 (39%), Positives = 187/311 (60%), Gaps = 10/311 (3%)

Query: 3   STLNLHQVHSDYQGQQILKGLDLTLAQGEILALLGPSGCGKTTLLRAVAGLQAISQGEIQ 62
           S L +  +  DY   + L  + +T+ +GE + +LGPSGCGK+TLLR + G+   S GEI+
Sbjct: 2   SELEISNISKDYGASRALHPVSITVERGEFVTILGPSGCGKSTLLRILTGISQPSGGEIR 61

Query: 63  INGKTVSGAGQFVPSEQRGIGMIFQDYALFPHLTVAENILFGVA--KLTTAQRKARLDDM 120
           + GK +  A      E R I M+FQ YALFPH++VA+N+ FG+   K+   +R  R+   
Sbjct: 62  LGGKRIDQA----QPEARDIAMVFQSYALFPHMSVAKNLGFGLKMKKVAKDERARRIAHA 117

Query: 121 LALVKLEGLAKRYPHELSGGQQQRVSIARALAYEPQLLLLDEPFSNIDAQVRHSMMAEIR 180
           L +  L GL  R P +LSGGQQQRV++ARA+  +P LLL DEP SN+DA++R ++  E+ 
Sbjct: 118 LEICNLTGLVDRMPRQLSGGQQQRVALARAIVMQPSLLLFDEPLSNLDAKLRDTLRHELT 177

Query: 181 SILKQRNVSAVFVTHSKDEAFVFADTLAIFSQGVIVQHGRAEDLYAAPNSRYVADFLGSG 240
            + ++   ++++VTH + EA   +D + + + G +V+ G   +LY AP   + A FLG  
Sbjct: 178 ELHRRIGATSLYVTHDQAEAMAMSDRIVVMNAGRVVEIGTPLELYRAPKHAFTAGFLGQT 237

Query: 241 NYLPAEVVDGHSVTTPIGQLRSLTPLSQSHAFNGQVFLRPQQLALSADDAGVGTITERRF 300
           N LP    +G     P GQ  S+T L Q+ A N Q+  RP+ + + AD AG GT++   F
Sbjct: 238 NLLPVS-AEGQQAQLPWGQ--SVT-LDQAAAGNVQISARPENIHICADQAGDGTVSAVSF 293

Query: 301 LGAFCHYWVKV 311
           +GA   Y V++
Sbjct: 294 MGANALYTVEI 304