Pairwise Alignments

Query, 403 a.a., transposase, mutator family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 401 a.a., IS256 family transposase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  395 bits (1015), Expect = e-114
 Identities = 182/396 (45%), Positives = 269/396 (67%), Gaps = 3/396 (0%)

Query: 5   DQLIDQLLADYESPQDLLGEQGILRQLTKKLAERALEAEMELHLGYAKHDAAGFNTGNSR 64
           D L  + L  ++  +D       + +L  +  E+ LE E++ HLGY KH   G N+GNSR
Sbjct: 6   DILNSEFLKQFKDSKDF---SSFMEELYVRGTEKMLEGELDHHLGYGKHSPEGRNSGNSR 62

Query: 65  NGKSRKSVRSIHGDIELETPRDRNGSFEPKLIKKGEKQLGGFDERIVSLYARGMSTRDIQ 124
           NGK+ K ++S +G++E+E PRDR G+FEP L+ K      G +E ++SLYA+GMSTRDI+
Sbjct: 63  NGKTSKKLKSKYGEVEIEVPRDRAGTFEPVLVPKRRGLAEGIEELVISLYAKGMSTRDIE 122

Query: 125 AHFEETYGVEVSPTFISQITNAVLDEVKAWQLRPLAPVYPIVYLDCLVVRSRDSGSIQNK 184
               E YG  +S + +S IT+ V +++  WQ RPL  +Y IV++D +  + R SG + +K
Sbjct: 123 EQLREIYGFNLSESTVSTITHRVSEDIAEWQQRPLERLYCIVWMDGIAFKVRHSGKVISK 182

Query: 185 SVYLALGVNTDGEKELLGLWIAQTEGAKFWLSVMNELKNRGVEDIFIACVDGLKGFPDAI 244
           +VYLA+G+N++G KELLG+W++++E A FW+ V+ +++ RGVEDI I C D L GF   I
Sbjct: 183 TVYLAVGLNSEGRKELLGMWLSESESAAFWVGVLTDIRARGVEDILITCTDNLSGFTQGI 242

Query: 245 EAVYPKTQVQLCIVHQIRNSLRFVSWKERKAVAADLKTIYGAATLQQAELALEQFAKTWD 304
            +V+P+   Q+C+VHQIRNS R+V W+++KA AAD+K IY A T + A + LE+F + W 
Sbjct: 243 RSVFPEAATQVCVVHQIRNSCRYVVWRDKKAFAADMKAIYNAPTREVAAVELERFEQAWG 302

Query: 305 KQHPSISKSWRENWTRLSVFFDYPPEIRKVIYTTNAIESLNASLRQVTKTRRSFPSDDAV 364
            ++P   KSWR NW  L+VFFD+P EIR++IYTTN IE+LN  +R+ TK + +FP D +V
Sbjct: 303 SKYPYAVKSWRANWEELTVFFDFPLEIRRIIYTTNLIENLNGKIRKYTKGKGAFPDDGSV 362

Query: 365 LKLLYLALHQIAKKWTMPLRDWKPAMTQFMIMYSDR 400
            K ++LAL +I KKWT P R+W   M QF+ +Y +R
Sbjct: 363 RKAVFLALREITKKWTQPQRNWGLIMNQFVTLYPER 398