Pairwise Alignments

Query, 403 a.a., transposase, mutator family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 400 a.a., ISSod4, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  371 bits (953), Expect = e-107
 Identities = 180/394 (45%), Positives = 268/394 (68%), Gaps = 8/394 (2%)

Query: 9   DQLLADYESPQDLLGEQGILRQLTKKLAERALEAEMELHLGYAKHDAAGFNTGNSRNGKS 68
           +Q L D +S + L G+  IL  L K+L E AL+AE+E HL    HD       N +NGK+
Sbjct: 8   EQALKDLQSGKSLTGKDSILGPLIKQLTEAALQAELEQHLA---HDPQP----NRKNGKT 60

Query: 69  RKSVRSIHGDIELETPRDRNGSFEPKLIKKGEKQLGGFDER-IVSLYARGMSTRDIQAHF 127
            K+++   G+ EL+ PRDRNG+FEP+LIKK +  L    ER ++S+++ GMS RDI  H 
Sbjct: 61  PKTIKHPSGNFELDAPRDRNGTFEPQLIKKNQTTLTDEIERKVLSMFSIGMSYRDINQHV 120

Query: 128 EETYGVEVSPTFISQITNAVLDEVKAWQLRPLAPVYPIVYLDCLVVRSRDSGSIQNKSVY 187
           E+ YG+ VS   +S IT+ ++ E+KAWQ RPL   YPIV+LD +  + ++ G   +K+VY
Sbjct: 121 EDMYGLNVSNATVSAITDKLIPELKAWQQRPLDSHYPIVWLDAIHYKVKEDGRYVSKAVY 180

Query: 188 LALGVNTDGEKELLGLWIAQTEGAKFWLSVMNELKNRGVEDIFIACVDGLKGFPDAIEAV 247
             L +N  G+KE+LGL +++ EGA +WLSV+ +L NRGV+DI IACVDGL GFP+AI ++
Sbjct: 181 TLLALNMKGKKEILGLHLSENEGANYWLSVLTDLNNRGVKDILIACVDGLTGFPEAIASI 240

Query: 248 YPKTQVQLCIVHQIRNSLRFVSWKERKAVAADLKTIYGAATLQQAELALEQFAKTWDKQH 307
           +P T+ QLC++HQIRNS+++V+ K +KA  ADLK +Y A + + AE+AL++    W   +
Sbjct: 241 FPHTETQLCVIHQIRNSMKYVASKNQKAFMADLKPVYRAVSKEAAEMALDELEAKWGDAY 300

Query: 308 PSISKSWRENWTRLSVFFDYPPEIRKVIYTTNAIESLNASLRQVTKTRRSFPSDDAVLKL 367
           P +  SWR  W  LS +F YP  IRKVIYTTNA+E+++   R++TKT+ +FP+++++LKL
Sbjct: 301 PLVINSWRRKWHNLSHYFKYPEHIRKVIYTTNAVEAVHRQFRKLTKTKGAFPNENSLLKL 360

Query: 368 LYLALHQIAKKWTMPLRDWKPAMTQFMIMYSDRV 401
           LY  +   + KWTMP+ +W   ++Q  I +  R+
Sbjct: 361 LYAGILNASDKWTMPIHNWSLCLSQLAIYFEGRL 394