Pairwise Alignments

Query, 224 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 225 a.a., two component system DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

 Score =  161 bits (408), Expect = 8e-45
 Identities = 90/223 (40%), Positives = 140/223 (62%), Gaps = 7/223 (3%)

Query: 1   MKLLLVEDNPMLVSELEKQLKQAGYVTDITDKALEADYLVKETQYDCVILDIGLPDGNGL 60
           MKLL+VED  +L   L  +L ++G+V +    A EA Y  ++  +D  I+D+GLP  +GL
Sbjct: 1   MKLLVVEDEALLRHHLYTRLGESGHVVEAVADAEEALYQAEQYHFDLAIIDLGLPGISGL 60

Query: 61  ELLEGWRNQGISTPVIMLTARSQWHEKVEGFNAGADDYLGKPFHAQELLARIQALIHRAH 120
           EL+   R+Q  + P+++LTAR  W +KVEG  AGADDYL KPF  +EL AR+ AL+ R+ 
Sbjct: 61  ELITRLRSQDKTFPILILTARGNWQDKVEGLAAGADDYLVKPFQFEELEARLNALLRRSS 120

Query: 121 GRLNNPNKQLSYGGVTLDEAEQTVSVGEQLYELTAMEFRLLKIFLMSPKKLLSKAQLTDK 180
           G   +    ++ G + LD   +  ++ EQ   LTA E+R+L+  +   +++++K +L ++
Sbjct: 121 GFTQS---TIAAGPLVLDLNRKQATLDEQALALTAYEYRILEYLMRHHQQVVAKDRLMEQ 177

Query: 181 LYQFDDEKESNVVEVYVTHLRKKL----GKTAIETRRGQGYIF 219
           LY  D+E++ NV+EV V  LR+KL    G   I+T RG GY+F
Sbjct: 178 LYPGDEERDPNVIEVLVGRLRRKLEGERGFKPIDTVRGLGYLF 220