Pairwise Alignments

Query, 224 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 219 a.a., DNA-binding response regulator YgiX, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  156 bits (395), Expect = 3e-43
 Identities = 87/217 (40%), Positives = 131/217 (60%), Gaps = 4/217 (1%)

Query: 1   MKLLLVEDNPMLVSELEKQLKQAGYVTDITDKALEADYLVKETQYDCVILDIGLPDGNGL 60
           M+++LVEDN +L   +   L + G   D      +A   +K   +  ++LD+GLPDGNG 
Sbjct: 1   MRIMLVEDNELLAQGICLSLAKMGMQVDHLSSYHQALVGIKNETFSAIVLDLGLPDGNGK 60

Query: 61  ELLEGWRNQGISTPVIMLTARSQWHEKVEGFNAGADDYLGKPFHAQELLARIQALIHRAH 120
           +LL+ WR+QG+S P I+LTA + +  K+E  + GADDYLGKPF  +EL ARI+A++ R  
Sbjct: 61  DLLKAWRSQGVSIPTIVLTANTDFDTKLECLDVGADDYLGKPFDVRELAARIRAIVRRQF 120

Query: 121 GRLNNPNKQLSYGGVTLDEAEQTVSVGEQLYELTAMEFRLLKIFLMSPKKLLSKAQLTDK 180
           G  +N    L+ G +++D   + V+  +Q   L+  EF+LL     S  ++L++ QL   
Sbjct: 121 GLDHN---SLNIGALSIDLNTREVTFRDQNVSLSRREFQLLLELAQSAGRVLTRNQLEQL 177

Query: 181 LYQFDDEKESNVVEVYVTHLRKKLGKTAIETRRGQGY 217
            Y + DE  SN +EV++ HLRKKL    I+T RG GY
Sbjct: 178 TYGW-DEVGSNSIEVHIHHLRKKLANELIKTVRGIGY 213