Pairwise Alignments

Query, 631 a.a., DNA mismatch repair protein MutL (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 638 a.a., DNA mismatch repair protein from Pseudomonas simiae WCS417

 Score =  395 bits (1014), Expect = e-114
 Identities = 235/584 (40%), Positives = 341/584 (58%), Gaps = 50/584 (8%)

Query: 3   IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIEIDKGGSKLIKIRDNGSG 62
           I++L P+LANQIAAGEVVERPASV+KEL+ENS+D+GA RID+++++GG KL+++RD+GSG
Sbjct: 12  IELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRVRDDGSG 71

Query: 63  IPKEELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQSEAWQ 122
           I  ++L LAL+RHATSK+  L+DLE ++S GFRGEALASISSV+RLTLTSRT    +AWQ
Sbjct: 72  ISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRSAEQAWQ 131

Query: 123 AYAEGVEMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIALVR 182
              EG +MA +V PAAHPVG+++EV DLFFNTPARR+FLK++KTEF H+ E +KR+AL R
Sbjct: 132 VETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALAR 191

Query: 183 GDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQVAGRPFADEALRVECQHDDLRLSGYLQS 242
            D+ F L HNGKT+ +   A ++    +R++ + G  F ++AL +E + + LRL G++  
Sbjct: 192 FDVAFHLRHNGKTILSLHEAHDDAARARRVSAICGPGFLEQALPIEIERNGLRLWGWVGL 251

Query: 243 P-WSTVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQKA-EVEQPGYVLMLDIDPHQVDVNV 300
           P +S    D  YF+VNGR VRD+LV HAVRQA+         P +VL  ++DP  VDVNV
Sbjct: 252 PTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPSVVDVNV 311

Query: 301 HPAKHEVRFHQSRYVHDYILQALQSALEEAGELR-------------FEPHSPQIDDSSP 347
           HP KHEVRF   R VHD++   L   L   G++R               P  PQ  +  P
Sbjct: 312 HPTKHEVRFRDGRMVHDFLYGTLHRTL---GDVRPDDQLAAPIVTAVVRPSGPQAGEFGP 368

Query: 348 YVKPETESSAFELQSTESNAKYLGIDTTGERQAEARVVEYRSSDMPKMRTGTAVQSNAFG 407
             + E   +A  LQS +S   Y     T          +Y+ +  P+     A    A+ 
Sbjct: 369 --QGEMSLAANLLQSPQSQPSY-----TAPNAGAGSGYQYQYTPRPQSAVPVAEAQAAYR 421

Query: 408 SMSVPRETRSGSSGESRPRAELPSKTAIASYGALLQTPSYSVQDKAYQPTLPMPSILDGQ 467
               P            P AE  +  A+   G  +    Y++              L G 
Sbjct: 422 EFFAP-----------LPGAEPGAPVALPEGGGDIPPLGYALAQ------------LKGI 458

Query: 468 FWVFTDGPKLSLLRIESVALATRSDEIETKLAT-GLIGQPLLMPVSVAADTDWSSLLDEH 526
           + +  +   L L+ + +       + ++  +A+ GL GQPLL+P S+A     +   +EH
Sbjct: 459 YILAENAHGLVLVDMHAAHERIMYERLKIAMASEGLSGQPLLVPESLAVSQREADCAEEH 518

Query: 527 ATLIRQLGLEL-TIRYQQLIIKKVPPYLRDCQLARVIPEWLQSL 569
            ++ ++LG EL  +  + L I+++P  L+  +  R++ + L  L
Sbjct: 519 HSVFQKLGFELQRLGPETLAIRQIPALLKQAEANRLVADVLADL 562