Pairwise Alignments

Query, 631 a.a., DNA mismatch repair protein MutL (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 615 a.a., methyl-directed mismatch repair protein from Escherichia coli BL21

 Score =  467 bits (1201), Expect = e-136
 Identities = 288/610 (47%), Positives = 370/610 (60%), Gaps = 64/610 (10%)

Query: 1   MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIEIDKGGSKLIKIRDNG 60
           M IQ+LPPQLANQIAAGEVVERPASVVKELVENSLDAGA+RIDI+I++GG+KLI+IRDNG
Sbjct: 1   MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60

Query: 61  SGIPKEELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQSEA 120
            GI K+ELALAL+RHATSK+ SLDDLEAI+S GFRGEALASISSVSRLTLTSRTAEQ EA
Sbjct: 61  CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120

Query: 121 WQAYAEGVEMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180
           WQAYAEG +M V V PAAHPVG+T+EV+DLF+NTPARR+FL+++KTEF HIDE ++RIAL
Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180

Query: 181 VRGDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQVAGRPFADEALRVECQHDDLRLSGYL 240
            R D+   L+HNGK VR YR      Q  +RL  + G  F ++AL +E QH DL L G++
Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240

Query: 241 QSPWST--VLTDTHYFYVNGRLVRDRLVNHAVRQAFAQKAEV-EQPGYVLMLDIDPHQVD 297
             P  T   L +  Y YVNGR++RDRL+NHA+RQA   K    +QP +VL L+IDPHQVD
Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300

Query: 298 VNVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELRFEPHSPQIDDSSPYVKPETESSA 357
           VNVHPAKHEVRFHQSR VHD+I Q + S L++  E      +P   D  P   P      
Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLE------TPLPLDDEPQPAP------ 348

Query: 358 FELQSTESNAKYLGIDTTGERQAEARVVEYRSSDMPKMRTGTAVQSNAFGSMSVPRETRS 417
              +S   N    G +   E  A   V                           PR T +
Sbjct: 349 ---RSIPENRVAAGRNHFAEPAAREPV--------------------------APRYTPA 379

Query: 418 GSSGESRPRAELPS------KTAIASYGALLQTPSYSVQDKAYQPTLP-----------M 460
            +SG SRP A  P+      K     Y  LLQTP+   + KA +P  P           +
Sbjct: 380 PASG-SRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKLKAPEPQEPALAANSQSFGRV 438

Query: 461 PSILDGQFWVFTDGPKLSLLRIESVALATRSDEIETKLATGLIGQPLLMPVSVAADTDWS 520
            +I+     +      +SLL +       R  ++ T     +  QPLL+P+ +    +  
Sbjct: 439 LTIVHSDCALLERDGNISLLSLPVAERWLRQAQL-TPGEAPVCAQPLLIPLRLKVSAEEK 497

Query: 521 SLLDEHATLIRQLGLELTIRYQQLIIKKVPPYLRDCQLARVIPEWLQSLRFEAP-APNAL 579
           S L++  + + +LG++     Q + I+ VP  LR   L  +IPE +  L  ++   P  +
Sbjct: 498 SALEKAQSALAELGIDFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAKQSVFEPGNI 557

Query: 580 AIWLAEQSLT 589
           A W+A   ++
Sbjct: 558 AQWIARNLMS 567