Pairwise Alignments

Query, 499 a.a., yjeF protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 527 a.a., NAD(P)HX epimerase / NAD(P)HX dehydratase from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  166 bits (421), Expect = 1e-45
 Identities = 169/500 (33%), Positives = 226/500 (45%), Gaps = 60/500 (12%)

Query: 34  YQLVERAGRAAFDCLATQIARQPRLESMPLLVLAGSGNNGADALVCA----RLALEAGHK 89
           + L+ RAG A       ++AR     +  + V  G GNNG D LV A    + A E G  
Sbjct: 43  HTLMSRAGLAV-----ARLARALAPHARCIWVACGPGNNGGDGLVAATHLHQWAQERGAA 97

Query: 90  VMVFLL-----KTKGTPEFEQALSAYLNQGGIADSPNIDAILQAPMLIDGLLGTGVHGGV 144
             V +      + +   +  QAL A     G+  SP   A     + ID LLG G     
Sbjct: 98  PEVIVTHALQDEARMPADARQALHA-ARAAGVPFSPQPPAHFD--LAIDALLGIGAQRAF 154

Query: 145 REEVAALIQAINQSDAWVLSLDLPSGIVADTGVVAQAAVMAD------LTLCFGGLKQGL 198
              +A  +  +  S   VL +DLPSG+ ADTGV+A     A        TL    LK GL
Sbjct: 155 EGTLAQWLGMLRASAQPVLCVDLPSGLDADTGVLATLTAGATGLPGPRHTLSLLTLKPGL 214

Query: 199 LTSKARHYCGDLDFADLGLTPFFKTPNATRVGGEILKSYFAARARDSHKGQSGKVTLIGG 258
            T   R  CG + F DLG  P  + P +  + G    +   AR   SHKG  G V ++GG
Sbjct: 215 FTGAGRDACGGVWFDDLGAEPAPEVPVSAWLAGRPPST--GARPHASHKGSFGDVLVLGG 272

Query: 259 D------FGMAGAIRLASEACLRAGAGLVTV------ISRPEHQLTVNVSRPELMFWGCE 306
                   GM GA  LA+ A L AGAG V V       + P H   V    PELMF   +
Sbjct: 273 QGIAAQGAGMTGAAVLAARAALHAGAGRVFVGLLEGDAAHPTHWDPVC---PELMFRRPK 329

Query: 307 LVDMEVYLRLGWAQVVVLGPGLGKHDWGYNLFKAAGLSDKPCVLDADALNLLSNEPRRQT 366
            + +E     G + V   G G         +  AA       VLDADALN ++ +   QT
Sbjct: 330 RL-LEPGALEGASVVCGCGGGTSVAALLPRVLSAA----PTLVLDADALNAIAADSALQT 384

Query: 367 N--------W--VLTPHPGEAARLLGCNVAEIEQDRFAAVRALQQKYGGVVLLKGAGTVI 416
                    W  VLTPHP EAARLLG +   +  DR  A +AL  ++G   +LKG+G+V+
Sbjct: 385 QLGHRHSHGWTTVLTPHPLEAARLLGSSTQAVMLDRLRAAQALADRFGAFCVLKGSGSVL 444

Query: 417 -FDGKQMVVAPVGNPGLASGGCGDVLSGIIGALMAQ---GMDNMQATVVGVV-VHGCAAD 471
              G+  ++   GN  LA+ G GDVL+G+IG+ +A      D +Q  +   V  HG  AD
Sbjct: 445 ATPGEAPLINASGNAALATAGTGDVLAGMIGSAIAPAGLSGDRLQDRIAAAVHQHGWLAD 504

Query: 472 LAAVQGERGMLASDLMPFIR 491
                  RG+ AS L   +R
Sbjct: 505 HWEDDIARGLTASRLAARVR 524