Pairwise Alignments

Query, 499 a.a., yjeF protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 513 a.a., bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase from Dickeya dadantii 3937

 Score =  350 bits (898), Expect = e-101
 Identities = 221/501 (44%), Positives = 295/501 (58%), Gaps = 17/501 (3%)

Query: 5   LSSLPTALFTQEQVRDAELLAVSEGKTTLYQLVERAGRAAFDCLATQIARQPRLESMPLL 64
           L  LP  +F  + +R  E  A      +L  L++RAG AAF     +IA+Q    +   L
Sbjct: 14  LPDLPQTVFLPDWLRREEPHAADYVGVSLNTLMQRAGDAAF-----RIAQQQYPTARHWL 68

Query: 65  VLAGSGNNGADALVCARLALEAGHKVMVFLLK-TKGTP-EFEQALSAYLNQGGIADSPNI 122
           +L G GNNG D  V A LA  AG  V V      +  P E   A  A+ + GG     ++
Sbjct: 69  ILCGHGNNGGDGYVVAALARAAGVAVTVVAGSGDRSLPAEAHLARQAWCDAGGCEQ--HV 126

Query: 123 DAIL--QAPMLIDGLLGTGVHGGVREEVAALIQAINQSDAWVLSLDLPSGIVADTGVVAQ 180
           DA+      ++IDGLLGTG+    R    ALI   N+  A +++LD+PSG+ A TG  A 
Sbjct: 127 DALWPDDIDLIIDGLLGTGLTSAPRAPYDALIAQANRHPAPIVALDIPSGLNAQTGACAG 186

Query: 181 AAVMADLTLCFGGLKQGLLTSKARHYCGDLDFADLGLTPFFKTPNA--TRVGGEILKSYF 238
           AA+ A  T+ F  LK GLLT +AR   G L   DLGL  +    +A   R+    L  + 
Sbjct: 187 AAIHAAHTVTFITLKPGLLTGQARDVVGQLHHHDLGLGDWLAQQSAPIARLTAASLTQWL 246

Query: 239 AARARDSHKGQSGKVTLIGGDFGMAGAIRLASEACLRAGAGLVTVISRPEHQLTVNVSRP 298
             R   +HKG+ G++ +IGGD G  GAI +A EA LR+GAGLV V++   +   + V+RP
Sbjct: 247 KPRRPGAHKGEHGRLLIIGGDEGTGGAIFMAGEAALRSGAGLVRVLTHKSYLAALLVARP 306

Query: 299 ELMFWGCELVDMEVYLRLGWAQVVVLGPGLGKHDWGYNLFKAAGLSDKPCVLDADALNLL 358
           ELM    EL    V   + WA VVV+GPGLG+ +WG N  + A   +K  + DADALNLL
Sbjct: 307 ELMVQ--ELTTDSVKAGVEWADVVVIGPGLGQREWGKNALRIAENCNKSMLWDADALNLL 364

Query: 359 SNEPRRQTNWVLTPHPGEAARLLGCNVAEIEQDRFAAVRALQQKYGGVVLLKGAGTVIF- 417
           +  P ++ N VLTPHPGEAARLL C +A+IE DR  A + L ++YGGVVLLKGAGTV+  
Sbjct: 365 AISPHKRQNRVLTPHPGEAARLLNCRIADIESDRLLAAQRLVKRYGGVVLLKGAGTVLAG 424

Query: 418 DGKQMVVAPVGNPGLASGGCGDVLSGIIGALMAQGMDNMQATVVGVVVHGCAAD-LAAVQ 476
           +  ++ +  VGNPG+A+GG GDVL+G+IGA++AQG+    A   G V HG AAD LA  Q
Sbjct: 425 EQGELAIVDVGNPGMATGGMGDVLAGMIGAMLAQGLSLYDAACAGCVAHGAAADWLARRQ 484

Query: 477 GERGMLASDLMPFIRQLVNSD 497
           G RGMLA+DLM  + Q VN +
Sbjct: 485 GTRGMLATDLMAVLPQYVNPE 505