Pairwise Alignments

Query, 267 a.a., chemotaxis protein CheY/response regulator receiver domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 128 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 86.3 bits (212), Expect = 3e-22
 Identities = 39/121 (32%), Positives = 72/121 (59%)

Query: 146 DVRVLVVDDSRMARNVIKRTIGNLGIKLITEAEDGAQAIELMRHNMFDLIITDYNMPSVD 205
           ++++L+VDD    R +IK  + +LG     EA+DG  AI ++     D ++TD+NMP + 
Sbjct: 4   NMKILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGITAIPILNSGSIDFLVTDWNMPGMT 63

Query: 206 GLALTQFIRSESQQSHVPILMVSSEANDAHLSNVSQAGVNALCDKPFEPKLVKQLLYQLL 265
           G+ L + +R++ +   +P+LMV++EA    +   +QAGVN    KPF    +K+ + ++ 
Sbjct: 64  GIDLLRHVRADEKLRGLPVLMVTAEAKREQIIEAAQAGVNGYVVKPFTALALKEKIEKIF 123

Query: 266 E 266
           +
Sbjct: 124 D 124



 Score = 52.0 bits (123), Expect = 6e-12
 Identities = 31/124 (25%), Positives = 60/124 (48%)

Query: 11  LSMLIVEPSETQRRIIIKCLQQEGIVSIEHAANIAEAKGLIARHKPDLIASAMHFEDGTA 70
           + +LIV+   T RRII   L+  G  +   A +   A  ++     D + +  +    T 
Sbjct: 5   MKILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGITAIPILNSGSIDFLVTDWNMPGMTG 64

Query: 71  TEFLSYLRSKSEYKDIQFMLVSSECRREQLESFRQSGVVAILPKPFNAEHLGKALNATID 130
            + L ++R+  + + +  ++V++E +REQ+    Q+GV   + KPF A  L + +    D
Sbjct: 65  IDLLRHVRADEKLRGLPVLMVTAEAKREQIIEAAQAGVNGYVVKPFTALALKEKIEKIFD 124

Query: 131 LLSH 134
            + H
Sbjct: 125 RIGH 128