Pairwise Alignments

Query, 267 a.a., chemotaxis protein CheY/response regulator receiver domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 129 a.a., Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 89.0 bits (219), Expect = 5e-23
 Identities = 43/122 (35%), Positives = 75/122 (61%)

Query: 146 DVRVLVVDDSRMARNVIKRTIGNLGIKLITEAEDGAQAIELMRHNMFDLIITDYNMPSVD 205
           +++ LVVDD    R +++  +  LG   + EAEDG  A+  ++   F  II+D+NMP++D
Sbjct: 5   ELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFIISDWNMPNMD 64

Query: 206 GLALTQFIRSESQQSHVPILMVSSEANDAHLSNVSQAGVNALCDKPFEPKLVKQLLYQLL 265
           GL L + IR++S  S +P+LMV++EA   ++   +QAG +    KPF    +++ L ++ 
Sbjct: 65  GLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIF 124

Query: 266 EE 267
           E+
Sbjct: 125 EK 126



 Score = 52.4 bits (124), Expect = 5e-12
 Identities = 32/127 (25%), Positives = 61/127 (48%)

Query: 6   LSPSELSMLIVEPSETQRRIIIKCLQQEGIVSIEHAANIAEAKGLIARHKPDLIASAMHF 65
           ++  EL  L+V+   T RRI+   L++ G  ++E A +  +A   +       I S  + 
Sbjct: 1   MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFIISDWNM 60

Query: 66  EDGTATEFLSYLRSKSEYKDIQFMLVSSECRREQLESFRQSGVVAILPKPFNAEHLGKAL 125
            +    E L  +R+ S    +  ++V++E ++E + +  Q+G    + KPF A  L + L
Sbjct: 61  PNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKL 120

Query: 126 NATIDLL 132
           N   + L
Sbjct: 121 NKIFEKL 127