Pairwise Alignments

Query, 90 a.a., DNA-binding protein, HU family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 90 a.a., transcriptional regulator HU subunit alpha from Pseudomonas simiae WCS417

 Score =  102 bits (254), Expect = 9e-28
 Identities = 52/90 (57%), Positives = 66/90 (73%)

Query: 1  MNKTELIAKIAENADITKAQATRALKSFEAAITESMKNGDKISIVGFGSFETTTRAARTG 60
          MNK+ELI  IA +ADI KA A RAL +   ++T ++K GD + +VGFG+F  T R ARTG
Sbjct: 1  MNKSELIDAIAASADIPKAAAGRALDAVIESVTGALKAGDSVVLVGFGTFSVTDRPARTG 60

Query: 61 RNPQTGKEIQIAEATVPKFKAGKTLRDSVN 90
          RNPQTGK +QIA A  P FKAGK L+++VN
Sbjct: 61 RNPQTGKALQIAAAKKPGFKAGKALKEAVN 90