Pairwise Alignments

Query, 90 a.a., DNA-binding protein, HU family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 90 a.a., DNA binding regulator, beta subunit B from Pseudomonas putida KT2440

 Score =  100 bits (249), Expect = 4e-27
 Identities = 52/90 (57%), Positives = 65/90 (72%)

Query: 1  MNKTELIAKIAENADITKAQATRALKSFEAAITESMKNGDKISIVGFGSFETTTRAARTG 60
          MNK+ELI  IA +ADI KA A RAL +   ++T ++K GD + +VGFG+F    RA RTG
Sbjct: 1  MNKSELIDAIAASADIPKAVAGRALDAVIESVTGALKQGDDVVLVGFGTFSVKERAERTG 60

Query: 61 RNPQTGKEIQIAEATVPKFKAGKTLRDSVN 90
          RNPQTGK I+I  A VP FKAGK L+D+VN
Sbjct: 61 RNPQTGKAIKIEAAKVPGFKAGKGLKDAVN 90