Pairwise Alignments

Query, 90 a.a., DNA-binding protein, HU family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 90 a.a., Bacterial nucleoid DNA-binding protein from Kangiella aquimarina DSM 16071

 Score =  108 bits (269), Expect = 2e-29
 Identities = 55/90 (61%), Positives = 69/90 (76%)

Query: 1  MNKTELIAKIAENADITKAQATRALKSFEAAITESMKNGDKISIVGFGSFETTTRAARTG 60
          MNK+ELI  IA  ADI+KA A RAL S   AIT+S++ G+++S+VGFG+F    RAARTG
Sbjct: 1  MNKSELIDAIAAGADISKAAAGRALDSMLGAITDSLQKGEQVSLVGFGTFAVKERAARTG 60

Query: 61 RNPQTGKEIQIAEATVPKFKAGKTLRDSVN 90
          RNP+TG+ IQI  A VP FKAGK L+D+VN
Sbjct: 61 RNPKTGETIQIKAAKVPGFKAGKALKDAVN 90