Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 762 a.a., Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) from Variovorax sp. SCN45

 Score =  108 bits (269), Expect = 1e-27
 Identities = 72/241 (29%), Positives = 124/241 (51%), Gaps = 9/241 (3%)

Query: 477 IEAQRIEHMA----ELERINQELDRFAYIASHDLKSPLRGIEQLTTWLSEDLVDNTNENV 532
           I  +R E +A    EL R+N+EL+ F+Y  SHDL++P+R I      +++      +   
Sbjct: 501 IVLRRAEELAAVASELGRVNKELEAFSYTVSHDLRAPMRHIAGYVDLVAQTEGKQLSARA 560

Query: 533 QKYLGLIQNRIQRMVRLLDGLLTFSRIGRVDNEMVEVDSRQLVEDM---FALVAPPQGFE 589
            +YL  +++      +++D LL FSR+GR   +  +VDS  LV+ +      + P +  E
Sbjct: 561 HRYLSHVKDAAAFAGQMVDALLDFSRMGRSALKQRQVDSASLVDGLVRELTRLEPQRNIE 620

Query: 590 LVLEGDFPHFKTVKTLLELVVRNLISNAIKH-HDRGFGVLKVLCETKNTYYWFSVVDDGP 648
             ++ D P       LL++ VRNL++NA+K+   R    + V     +      V D+G 
Sbjct: 621 WQVDADLPLLYADPLLLQVAVRNLLANAVKYSRTRSPSRIAVRAIHSDLGDGLEVQDNGV 680

Query: 649 GISSEFQLKVFEMFQTLRPRDEVEGSGLGLSLVKKTVDSLGGKIQLE-SVGRGCCFRFSW 707
           G   ++  K+F +FQ L   ++ EG+G+GL+ VK+ V+  GG +  +  +  G  F F  
Sbjct: 681 GFQMKYVDKLFGVFQRLHQAEDFEGTGIGLANVKRIVERHGGTVWAKGEIDAGASFGFIL 740

Query: 708 P 708
           P
Sbjct: 741 P 741