Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 514 a.a., PAS domain-containing sensor histidine kinase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  150 bits (380), Expect = 1e-40
 Identities = 102/364 (28%), Positives = 176/364 (48%), Gaps = 18/364 (4%)

Query: 356 NEKRFRLIIEASPSALFMVDKTGVITLVNTQGERLFGYTREELLGRSINMLLPETLREIH 415
           +E +   II+ +   +  +D+ GV+ +VN    RLF Y   EL+GR INML+PE  + +H
Sbjct: 142 SESKINSIIQTAVDGIITIDRRGVMEMVNPAAARLFEYEEHELIGRKINMLMPEPDQSLH 201

Query: 416 QQHLSHYLVHPIAKNMSMRDDLLGCCKDGTPLAVEVGLTPVHFSNGIYILTTINNISERK 475
             ++ HY      + + +  ++ G  K GT   + + ++ V  ++       I++I+++K
Sbjct: 202 DNYMHHYHETGERRIIGIGREVSGLKKSGTIFPLYLSISEVQLTDRKVYTGFIHDITQQK 261

Query: 476 RIEAQRIEHMAELERINQELDRFAYIASHDLKSPLRGIEQLTTWLSEDLVDNTNENVQKY 535
             E +   + AELER N+EL  FAY++SHDL+ PLR I+     L     +  ++  + Y
Sbjct: 262 LSEERLRRYAAELERSNRELQDFAYVSSHDLQEPLRKIQAFGDRLKTKEYEKLSDQGKDY 321

Query: 536 LGLIQNRIQRMVRLLDGLLTFSRIGRVDNEMVEVDSRQLVEDMFA---LVAPPQGFELVL 592
           +  + N   RM  L++ LL FSR+       V+V    ++ D+ +   +     G + + 
Sbjct: 322 VDRMLNAASRMQNLINDLLDFSRVTSKSKAFVQVSLDSVLTDVLSDLEITIEKTGAQ-IQ 380

Query: 593 EGDFPHFKTVKTLLELVVRNLISNAIKHHDRG------------FGVLKVLCETKNTYYW 640
               PH +   T L  + +NL+SNAIK                  G  ++     +    
Sbjct: 381 RAPLPHIEADPTQLRQLFQNLVSNAIKFRKENEQPQINIFARELQGKARMTSTPGDEMVE 440

Query: 641 FSVVDDGPGISSEFQLKVFEMFQTLRPRDEVEGSGLGLSLVKKTVDSLGGKIQLES-VGR 699
             V D+G G   ++  ++F +FQ L  + + EGSG+GL++ +K     GG I   S  G 
Sbjct: 441 IHVQDNGIGFDEKYLDRIFNIFQRLEGQ-KYEGSGIGLAICRKIAVRHGGDITAHSQAGI 499

Query: 700 GCCF 703
           G  F
Sbjct: 500 GTTF 503



 Score = 65.9 bits (159), Expect = 5e-15
 Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 7/153 (4%)

Query: 341 RNRYQESMLTAELIANEKRFRLIIEASPSALFMVDKTGVITLVNTQGERLFGYTREELLG 400
           +NRY+        + ++ R + IIE +   +  +D  G +   N    R+FGY  EE++G
Sbjct: 6   QNRYRN-------VDDQSRLKAIIETAVDGIITIDTEGRMESANPAAARIFGYEPEEMIG 58

Query: 401 RSINMLLPETLREIHQQHLSHYLVHPIAKNMSMRDDLLGCCKDGTPLAVEVGLTPVHFSN 460
           R+++ML+PE    +H  ++  Y+     + +    ++LG  KDG+     + +  V   +
Sbjct: 59  RNVHMLMPEPDHGLHDGYIKRYMQTGEGQIIGKGREVLGKKKDGSLFPFFLSIAEVKLQD 118

Query: 461 GIYILTTINNISERKRIEAQRIEHMAELERINQ 493
            I     +++IS+ K+ E    E  +++  I Q
Sbjct: 119 KIIFTGIVHDISDLKKTEEALRESESKINSIIQ 151