Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 735 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  117 bits (293), Expect = 2e-30
 Identities = 114/423 (26%), Positives = 187/423 (44%), Gaps = 60/423 (14%)

Query: 335 AVISMARNRYQESMLTAELIANEKRFRLIIEASPSALFMVDKTGVITLVNTQGERLFGYT 394
           AVI +  +  ++      L  +  + +LI +A P  +  +DK       N   +  F   
Sbjct: 321 AVIQIVTDATEQVKSRQALETSAHQLKLITDALPVLIGYLDKDQRYRFTNYAYKAWFHQE 380

Query: 395 REELLGRSINMLLPETLREIHQQHLSHYLVHP---IAKNMSMRDDLLGCCKDGTPLAVEV 451
            EELLGRS+  ++ E      ++++   L          M  R+D L C        ++ 
Sbjct: 381 PEELLGRSVREVVGEKAYSGVKKYIERALAGERLNFEATMPFREDFLKC--------IQA 432

Query: 452 GLTP-VHFSNGIYILTTINNISE----RKRIEAQRIEHMA-------------------- 486
              P V     +   T +++I+E    R+ +E  + +  A                    
Sbjct: 433 TFVPDVQDGEVVGFFTLVSDITEQVEARRAVEKGKRQAQALAAELAVANEELRAANNEIQ 492

Query: 487 -----------ELERINQELDRFAYIASHDLKSPLRGIEQLTTWLSEDLVDNT--NENVQ 533
                      +L+RIN +LD F Y ASHDLK+P+  +E L   L E+L   +   E VQ
Sbjct: 493 STNSELSATNKQLKRINADLDNFIYTASHDLKAPILNVEGLVDALLEELPPESLQLEPVQ 552

Query: 534 KYLGLIQNRIQRMVRLLDGLLTFSRIGRVDNEM-VEVDSRQLV----EDMFALVAPPQGF 588
             + LI + ++R  R L+ L   S+  +  +     VD R++V    +D+   +   Q  
Sbjct: 553 HVVDLILDSVKRFKRTLEHLTEVSKFEKTQSTAPARVDLREVVADVQKDLALAIKAAQAQ 612

Query: 589 ELVLEGDFPHFKTVKTLLELVVRNLISNAIKHH--DRGFGVLKVLCETKNTYYWFSVVDD 646
             V     P     +  L  +V NL+SNAIK+   DR   ++ + C         SV D+
Sbjct: 613 IKVNVSSCPTILFSRKNLRSIVYNLLSNAIKYRSPDRA-PLISIDCHETEQCQVLSVSDN 671

Query: 647 GPGISSEFQLKVFEMFQTLRPRDEVEGSGLGLSLVKKTVDSLGGKIQLES-VGRGCCFRF 705
           G G+    + K+F MFQ L     VEGSG+GL +VKK +++ GG+I+++S VG G  F+ 
Sbjct: 672 GLGMDMSQKKKLFAMFQRL--HSHVEGSGVGLYMVKKIIENAGGRIEVQSKVGEGATFQV 729

Query: 706 SWP 708
            +P
Sbjct: 730 YFP 732



 Score = 29.3 bits (64), Expect = 7e-04
 Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 282 SKDVFYQSQLETMEGQVWRIDVSSESRFISRAEQTRSVWLQVIGCAFILALFYAVISMAR 341
           +++V +Q+QL   E +        E++  +   +    W QV+    +     A ++   
Sbjct: 150 TENVRFQAQLAASEER--------EAQANAAVAEKEQAWQQVL---VLNQELDARVATRT 198

Query: 342 NRYQESMLTAELIANEKRFRLIIEASPSAL-FMVDKTGVITLVNTQGERLFGYTREELLG 400
              QE+   AE    ++R + I   +P A+     +  ++ LVN     L G    ELLG
Sbjct: 199 RELQEAQQKAEW--QKERMQHIFMQAPVAIGIFTGERQIVELVNPMMCELLGRPARELLG 256

Query: 401 RSINMLLPE 409
           +SI  ++PE
Sbjct: 257 KSIFDVVPE 265