Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 652 a.a., PAS domain-containing sensor histidine kinase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  128 bits (321), Expect = 1e-33
 Identities = 106/374 (28%), Positives = 186/374 (49%), Gaps = 17/374 (4%)

Query: 341 RNRYQESMLTAELIANEKRFRLIIEASPS-ALFMVDKTGVITLVNTQGERLFGYTREELL 399
           R   Q   +  EL  +E++ RL+I++    A+ M++  G++   N   ER+ GY  +E++
Sbjct: 272 RMEQQLFQINEELKESEEKSRLLIDSVKDYAILMLNPEGIVMSWNVGAERIKGYAAKEII 331

Query: 400 GRSINMLLPETLREIHQQHLSHYLVHPIAKNMSMRDDLLGCCKDGTPLAVEVGLTPVHFS 459
           GR  +       RE  ++    Y +    +     D+     K G      V +TPV+ S
Sbjct: 332 GRHFSTFYT---REAIEKGFPQYELRKALEFGHFEDEGWRIRKGGNAFWANVVITPVYNS 388

Query: 460 NG--IYILTTINNISERKRIEAQRIEHMAELERINQELDRFAYIASHDLKSPLRGIEQLT 517
           +   +       +++ER+R E   +++  EL +IN ELD F Y ASHDLK+P+  +E L 
Sbjct: 389 DNRLLGFAKITRDLTERRRNEELMLKNK-ELVKINNELDNFVYAASHDLKAPITNLEGLL 447

Query: 518 TWLSEDLVDNTNENVQKYLGLIQNRIQRMVRLLDGLLTFSRIGRVDNEMVEVDSRQLVED 577
           T L EDL  +  ++ +  L L++  I ++  ++  L   +++   +     V    L+E+
Sbjct: 448 TALEEDLGQDRGKH-EAILRLMEGSIGKLKDVIADLSDVTKLNHAEATAESVHIPGLLEE 506

Query: 578 MFALVAP---PQGFELVLEG-DFPHFKTVKTLLELVVRNLISNAIKHHD-RGFGVLKVLC 632
           +   + P       E+ +E   F      +  L  ++ NL+SNA+K+ D +   ++K+  
Sbjct: 507 IKGSLDPMLKRSKAEIAIEDLAFDRLSYPRKNLRSILFNLVSNAVKYSDPQRKPIIKISS 566

Query: 633 E-TKNTYYWFSVVDDGPGISSEFQLKVFEMFQTLRPRDEVEGSGLGLSLVKKTVDSLGGK 691
             T +  Y  SV D+G G++     K+F +F+  R    VEGSG+GL LVK+ +D+ G  
Sbjct: 567 SITSDGDYVLSVADNGLGVAPRQVGKIFSLFK--RAHGHVEGSGIGLYLVKRILDNSGDS 624

Query: 692 IQLES-VGRGCCFR 704
           I ++S  G G  FR
Sbjct: 625 IMVDSKEGVGSTFR 638



 Score = 45.8 bits (107), Expect = 7e-09
 Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 6/146 (4%)

Query: 352 ELIANEKRFRLIIEA-SPSALFMVDKTGVITLVNTQGERLFGYTREELLGRSINMLLPET 410
           EL  +E+RFRL+IE  +  A+ M+D  G +   N    R+ GY  EE++G+  +      
Sbjct: 148 ELKESEERFRLLIEGVTDYAILMLDPAGNVATWNEGARRMKGYEAEEIIGKYFSKFYN-- 205

Query: 411 LREIHQQHLSHYLVHPIAKNMSMRDDLLGCCKDGTPLAVEVGLTPVHFSNG--IYILTTI 468
            RE   Q    + +     N S  D+     KDGT       LT ++ ++   I      
Sbjct: 206 -RESILQGFPDHELRQAKANGSFEDNGWRYRKDGTAFWANTVLTAIYNADKELIGFSKIT 264

Query: 469 NNISERKRIEAQRIEHMAELERINQE 494
            +++E+ R+E Q  +   EL+   ++
Sbjct: 265 RDLTEKLRMEQQLFQINEELKESEEK 290



 Score = 31.2 bits (69), Expect = 2e-04
 Identities = 13/48 (27%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 359 RFRLIIEA-SPSALFMVDKTGVITLVNTQGERLFGYTREELLGRSINM 405
           ++R+++E+ +  A+F++D TG +   NT   ++  Y  EE++G+  ++
Sbjct: 20  QYRILVESIADYAIFLLDTTGHVVTWNTGARQVEQYEAEEIIGKHFSV 67