Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 674 a.a., Sensory box histidine kinase from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  134 bits (338), Expect = 1e-35
 Identities = 108/383 (28%), Positives = 187/383 (48%), Gaps = 29/383 (7%)

Query: 350 TAELIANEKRFRLIIEASPS-ALFMVDKTGVITLVNTQGERLFGYTREELLGRSINMLLP 408
           +AEL A+E+R+RL+++A     ++ VD+ G IT      +RL G+TR +++GRS  +LL 
Sbjct: 277 SAELFASEQRYRLMVDAIQDYCIYFVDENGGITEWTESAQRLHGHTRSQIMGRSYEVLL- 335

Query: 409 ETLREIHQQHLSHYLVHPIAKNMSMRDDL-LGCCKDGTPLAVEVGLTPVHFSNG------ 461
            +     +  +    V  +AK     +       +DG+       LT +    G      
Sbjct: 336 -STDNAGEDEVDPGQVLRLAKAHGQWETRGWRLREDGSRFWAHTVLTALRNEAGELQGLS 394

Query: 462 --IYILTTINNISE-----RKRIEAQRIEHMAELERINQELDRFAYIASHDLKSPLRGIE 514
                +T   ++ +      + +E +  E   +L   N++LD F+++ SHDL++PLR I 
Sbjct: 395 SITRDMTAAKSLEDVMNDLNRELEKRVAERTQQLVAANKDLDVFSHMVSHDLRAPLRHIA 454

Query: 515 QLTTWLSEDLVDNTNENVQKYLGLIQNRIQRMVRLLDGLLTFSRIGRVDNEMVEVDSRQL 574
              + L E + D+ +    +Y   I    +RM  +++GLL ++R+GRV  +   V   QL
Sbjct: 455 SFVSLLQEQMGDSADTLALQYQNSIAKASKRMSLMIEGLLEYARLGRVAVDTQPVPIAQL 514

Query: 575 VEDMFALVA---PPQGFELVLEGDFPHFKTVKTLLELVVRNLISNAIKH-HDRGFGVLKV 630
           V+ + A +    P +  E V+E D P  +    LL   + NL+ NA+K+   R    ++V
Sbjct: 515 VQGVIAHLKQENPDRRIEWVIENDLPIVRGDAMLLAQALGNLLGNAVKYTRPRDAARIEV 574

Query: 631 LCETK----NTYYWFSVVDDGPGISSEFQLKVFEMFQTLRPRDEVEGSGLGLSLVKKTVD 686
             +       T+Y   + D+G G   E    +F MFQ      + EG+G GL+L ++ ++
Sbjct: 575 GWKVNPVGGRTFY---IADNGVGFDLEKAHNLFVMFQRQHHSMDFEGTGTGLALSQRIIE 631

Query: 687 SLGGKIQLESV-GRGCCFRFSWP 708
             GG+I  E+  G GC F F+ P
Sbjct: 632 RHGGRIWSETAPGEGCTFYFTLP 654