Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 372 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  112 bits (279), Expect = 4e-29
 Identities = 73/225 (32%), Positives = 117/225 (52%), Gaps = 7/225 (3%)

Query: 488 LERINQELDRFAYIASHDLKSPLRGIEQLTTWLSEDLVDNTNENVQKYLGLIQNRIQRMV 547
           L + N +L++FAY+ASHDL++PLR I      L      +   +   ++  I    ++M 
Sbjct: 133 LAQSNADLEQFAYVASHDLRTPLRNIVSYAQLLERRYKGHLGADANDFIDFIVENSKKMT 192

Query: 548 RLLDGLLTFSRIGRVDNEMVEVDSRQLVEDMFALVAPPQ---GFELVLEGDFPHFKTVKT 604
            L+  LL +SR+ R    +  V   + +      + P     G E+ + G  P    V+T
Sbjct: 193 LLISDLLEYSRVSRQAAPLEPVSVARALHLAMGNLRPDLEGCGAEIRI-GALPEVLAVET 251

Query: 605 LLELVVRNLISNAIKHHDRGFGV-LKVLCETKNTYYW-FSVVDDGPGISSEFQLKVFEMF 662
            L  + +NLI NA+K+  R   + + +  E   +  W FS+ D+G GI   +  K+FE+F
Sbjct: 252 YLVSLFQNLIGNAVKYRSRERPLQIAIAAERTGSDLWRFSLADNGIGIEPAYHDKIFEIF 311

Query: 663 QTLRPRDEVEGSGLGLSLVKKTVDSLGGKIQLES-VGRGCCFRFS 706
           Q L P  + EG+G+GL+L ++ V   GG I LES +GRG  F F+
Sbjct: 312 QRLDPSGDAEGTGIGLTLCRRIVHRFGGTIWLESEMGRGSTFFFT 356