Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 504 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  122 bits (307), Expect = 3e-32
 Identities = 85/250 (34%), Positives = 131/250 (52%), Gaps = 9/250 (3%)

Query: 464 ILTTINNISERKRIEAQRIEHMAELERINQELDRFAYIASHDLKSPLRGIEQLTTWLSED 523
           ++ T  +I+E K+ E    E    LER N +L++FAY+ASHDL++PLR I +    L   
Sbjct: 248 LIGTHLDITEHKKFEDILSEKNRALERSNADLEQFAYVASHDLQTPLRNIVRYAQLLELR 307

Query: 524 LVDNTNENVQKYLGLIQNRIQRMVRLLDGLLTFSRIGRVDNEMVEVDSRQLVEDM---FA 580
                + +   ++G I +  + M RL++ LL FSR  R    +  +   + V        
Sbjct: 308 YRSRIDADADDFIGFIVDSGKHMARLINDLLEFSRASRQAAPLAPIPVGEAVAQALKNLE 367

Query: 581 LVAPPQGFELVLEGDFPHFKTVKTLLELVVRNLISNAIKHH--DRGFGVLKVLCETKNTY 638
           L     G E+ + GD P     +  L  + +NL+ NA+K+   DRG   L V  E     
Sbjct: 368 LDLSKAGGEVEI-GDMPVVMADQVHLVSLFQNLLGNAVKYRAPDRGLR-LSVTAERAPGG 425

Query: 639 YW-FSVVDDGPGISSEFQLKVFEMFQTLRPRDEVEGSGLGLSLVKKTVDSLGGKIQLES- 696
           +W F+V D+G GI  E+  K+FE+FQ L P  + +G+G+GL+L ++ V   GG I L+S 
Sbjct: 426 FWRFAVADNGIGIDPEYHEKIFEIFQRLNPASDADGTGVGLALCRRIVHRFGGTIWLQSE 485

Query: 697 VGRGCCFRFS 706
            GRG  F F+
Sbjct: 486 PGRGTTFFFT 495