Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 774 a.a., signal transduction histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  109 bits (272), Expect = 6e-28
 Identities = 178/760 (23%), Positives = 300/760 (39%), Gaps = 105/760 (13%)

Query: 23  SSWLMLVAALTFMGISWFVLQEYLRERGEERFNNNVQELSEAVSRRMTAYEQVLRGGVGL 82
           +S + ++++L   GI + V     R+  E RF     EL+E     + A   + +G V L
Sbjct: 41  TSVMGVLSSLALFGIVFLVE----RDSSESRF----AELAEQRIIAIRANIAIAQGSVNL 92

Query: 83  F-----LSSRGVTRSEWQTYVANARLSDYYPGIQGLGFAELVTPATLDEFTQQVQQEGFS 137
                 ++  G T  E    +    L D+   IQG  +   V       + +  + +G +
Sbjct: 93  LAAHFAVAPAGSTSREGFRRLVEQTLKDH-DFIQGYSWDPRVPHDQRALYEEVARGDGLN 151

Query: 138 DFRIT---------PIGDRELYCVIKYLEPFDWRNQRAFGFDMCSEATRRSAILKAITSG 188
            F  T         P   R+ Y  I Y+EP    N+ A GFD+ S+  RR A+ +    G
Sbjct: 152 SFVFTERDAEGGLRPAVQRDEYIPIYYMEPMA-SNRPALGFDLASQPIRRLALEQGRDKG 210

Query: 189 LPKVSGKVTLVQETPENTQAGVLMYVPLY-RGQPMTEVERMQQAIGVVYALFRMNDLM-- 245
            P+ +G++TLVQE     Q GVL+  P++ +  P       +   G +  +FR+ DL+  
Sbjct: 211 APEATGRITLVQE--HGGQYGVLILAPVFDKAGPADPYSNRRSLTGYISGVFRLGDLISS 268

Query: 246 ---QGIMGKRFSGIKLAIYDGSEANRTHLMF-SSDPKLPSSKDV-FYQSQLETMEGQVWR 300
                 +      + + ++D S A     +F   D + P +     + S+   M G+ W 
Sbjct: 269 SSSSAAVTMALPMVDIHLFDMSAAEGERRLFPKQDSRTPDALAAGLHISESFAMAGRSWL 328

Query: 301 IDVSSESRFISRAEQTRSVWLQVIGCAFILALFYAVISMARNRYQESMLTAELIANEKRF 360
           +  +    F++ +    S  L V+  A +   FY ++  +R    E            + 
Sbjct: 329 LLATPSEAFVAASRPAASYVLLVV--ALLFTAFYLLLLKSRIAQAEKATALAREMGRAKL 386

Query: 361 RLIIEASPSALFMVDKTGVITLVNTQGERLFGYTREELLGRSINMLLPETLREIHQQHLS 420
           RL           + K   + L  +QG    G    E+LG      LP++        L 
Sbjct: 387 RL------GEAQRIAKLASVELDLSQGLFTTGDDAVEMLG------LPKSQTGGSVDFLL 434

Query: 421 HYLVHPIAKNMSMRDDLLGCCKDGTPL--AVEVG--------LTPVHFSNGIYILTTINN 470
               HP    M +RD L+G       L   +EVG        L       G  I+ T+ +
Sbjct: 435 Q-CAHP-DDRMMVRDALIGAADQAVDLEFRIEVGGEVRVLHALADDLAEEGRSII-TLQD 491

Query: 471 ISERKRIEAQR---IEHMAELERINQELDRFAYIASHDLKSPLRGIEQLTTWLSEDLVDN 527
           I+ RK  E +R   IE +AE +R  + L   A   +H++ +P + +    T++ E   + 
Sbjct: 492 ITARKAAEEERAAMIERIAETDRF-EALGTLAGGIAHEINTPTQYVGDNLTFMKESQAEL 550

Query: 528 TNENVQKYLGLIQNRIQRMV---------------------RLLDGLLTFSRIGRVDNEM 566
                   LG   +R  + +                     + LDG    ++I +   E 
Sbjct: 551 LELAQAVRLGARDDRDWQSIADKALALDLDFLATELPNAADQALDGTGQIAKIVQAIKEF 610

Query: 567 VEVDSRQL-------VEDMFALVAPPQ-----GFELVLEGDFPHFKTVKTLLELVVRNLI 614
               S+         + D+ A V   Q       +  L+ D P    V+  +  V+ NLI
Sbjct: 611 SYPSSKSAHPVDLNHMIDVVATVTRNQWKYVAEMDCDLDHDLPKVSAVEGEINQVLVNLI 670

Query: 615 SNAIKH-HDRGF---GVLKVLCETKNTYYWFSVVDDGPGISSEFQLKVFEMFQTLRPRDE 670
            NA +   ++G    G + V      +    SV D G GI +    ++FEMF T +    
Sbjct: 671 VNAAQAIAEKGGDAPGRITVRTRRLESEVELSVTDTGIGIPAANLKQIFEMFFTTKAPG- 729

Query: 671 VEGSGLGLSLVKKTVDSLGGKIQLES-VGRGCCFRFSWPI 709
            +G+G GL++ +  +   GG+I  ES  G G CFR   P+
Sbjct: 730 -QGTGQGLAISRSIIHRHGGQISAESQPGLGACFRIRLPL 768