Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 773 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  129 bits (323), Expect = 7e-34
 Identities = 102/355 (28%), Positives = 167/355 (47%), Gaps = 22/355 (6%)

Query: 363 IIEASPSALFMVDKTGVITLVNTQGERLFGYTREELLGRSINMLLPETLREIHQQHLSHY 422
           I+++S    F+ D    +   N       G++ +++ GR ++ +                
Sbjct: 428 IVDSSAELAFLADGEWNLIYANPFALEKLGWSLDQMSGRRLDAIADS------------- 474

Query: 423 LVHPIAKN--MSMRDDLLGCCKDGTPLAVEVGLTPVHFSNGIYILTTINNISERKRIEAQ 480
           L  P A     S R +      DG  L VEV    +     +Y +    +I+ER+R EA 
Sbjct: 475 LAVPAADGDRHSWRFEAALPTHDGRALPVEVLARDLLHEGVLYHVALARDITERQRWEAD 534

Query: 481 RIEHMAELERINQELDRFAYIASHDLKSPLRGIEQLTTWLSEDLVDNTNENVQKYLGLIQ 540
                A+LE  N +L++FAY+ASHDL+ PLR +    + L        + +  ++LG  +
Sbjct: 535 LCAKTAQLEHSNADLEQFAYVASHDLREPLRMVSSYLSLLERRYGQLLDSDGLEFLGFAK 594

Query: 541 NRIQRMVRLLDGLLTFSRIGRVDNEMVEVDSRQLVE---DMFALVAPPQGFELVLEGDFP 597
           +  QR+ RL+  LL FSRI R  + +  +  R  V+      ++     G  LVLE    
Sbjct: 595 DGAQRLDRLVLDLLEFSRIDRRGSPLAPMPVRPAVDVAARNLSVAMAEGGATLVLEDALD 654

Query: 598 HFKTV--KTLLELVVRNLISNAIKHHDRGFGVLKVL-CETKNTYYWFSVVDDGPGISSEF 654
               +     +  +++NLI NAIK+   G     V+ C      +  SV D+G GI  ++
Sbjct: 655 RAVVLGDSGQITRLLQNLIGNAIKYRSDGRPPRIVIGCRRDGACWELSVSDNGIGIEPQY 714

Query: 655 QLKVFEMFQTLRPRDEVEGSGLGLSLVKKTVDSLGGKIQLES-VGRGCCFRFSWP 708
             ++F +FQ L  RD  EG+G+GL++ KK V+  GG+I ++S  G G  F F+ P
Sbjct: 715 FERIFGIFQRLHTRDRFEGTGIGLAIAKKIVERHGGRIWVDSRPGEGSSFHFTLP 769