Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 531 a.a., two-component sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  109 bits (272), Expect = 4e-28
 Identities = 78/229 (34%), Positives = 119/229 (51%), Gaps = 7/229 (3%)

Query: 486 AELERINQELDRFAYIASHDLKSPLRGIEQLTTWLSEDLVDNTNENVQKYLGLIQNRIQR 545
           A L   N EL++FAY+ASHDLK PLR +    T L     D    +  +++   ++   R
Sbjct: 289 ARLAATNAELEQFAYVASHDLKQPLRMVSSYVTLLERQARDRLKGDELEFIAFARDGASR 348

Query: 546 MVRLLDGLLTFSRIGRVDNEM--VEVDSRQLVEDMFALVAPPQ--GFELVLEGDFPHFKT 601
           M RL+  LL +SR GR  ++   V +DS  L E +  L  P +    E+      P  + 
Sbjct: 349 MDRLITDLLEYSRTGRNADQFQPVALDS-VLAEALHNLKVPVEEAAAEVEAAQSLPTVRG 407

Query: 602 VKTLLELVVRNLISNAIKHHDRGFGV-LKVLCETKNTYYWFSVVDDGPGISSEFQLKVFE 660
            +  L  + +NLI NAI++        +++ C      +  SV D+G GI +E   +VF 
Sbjct: 408 NRGELVRLFQNLIGNAIQYRTADVRPHIRISCHADQAGWVVSVRDNGIGIPAEQCERVFG 467

Query: 661 MFQTLRPRDEVEGSGLGLSLVKKTVDSLGGKIQLES-VGRGCCFRFSWP 708
           +FQ L  R + EG+G+GL++ KK V+  GG+I +ES  G G  F F+ P
Sbjct: 468 IFQRLHTRAQYEGTGIGLAICKKIVEVHGGRIWVESESGEGATFFFTLP 516